| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3625 |
|---|
| Symbol | |
|---|
| ID | 5085484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 511298 |
|---|
| End bp | 514186 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640485183 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit A |
|---|
| Protein accession | YP_001169799 |
|---|
| Protein GI | 146279641 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
|---|
| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC AGAACCTTCT CCTGATCCTC GTGTCCCTGC CGTTCATGGG CGCGCTGGCG
GCGGCGACGC TGCCGGTGAA TGCCCACAAT GCGGCGGCCT GGATCTCGGG TCTGGTTCTG
GGGGGATCGC TGCTGGTGCT GGCGAGCCTT CATGGTGTCG TGGCCCGGGG AGAGGTGCTG
CGGGTCGGCA TCGACTGGGT GCCGCTGATC GGGCTCACGC TCGACTTCAG GCTGGATGGC
TTCGCCTGGA TGTTCGTGAC GCTGGTGATG GCGATCGGCG GGCTCGTGGT GCTTTACGCC
CGCTACTATC TGTCGAAAAC CGATCCTGTG CCGCGGTTCT ATTCCTTCCT CATGGCCTTC
ACCGGGGCGA TGATCGGCAT CCTGCTGTCA GGCAACATCC TGATGCTGGT GGTCTTCTGG
GAACTGACCT CGATCCTGTC CTTCCTGTTG ATCGGCTATT GGCACCAGGC CCAGACGGCG
CGCGACGGGG CACGGACGGC GCTGGTGGTG ACGGCGACCG GGGGGCTCTG CCTCCTGGCG
GCGATGCTGC TTCTGGGCCA GATCGTGGGC AGCTACGATC TCGACGCCGT GCTGGCCTCG
GGCGAGGCGA TCCGGACGCA TCAGGCCTAC CCGCTGGTGC TGGCGCTGTT CCTGATCGGG
GCCTTCACCA AGTCGGCGCA GTTCCCGTTC CATTTCTGGC TGCCGGGCGC GATGGCGGCG
CCGACGCCGG TTTCGGCCTA TCTCCATTCC GCGACGATGG TGAAGGCGGG GGTGTTCCTG
CTCGTCCGCT TCAGCCCGGC GCTCGGAGGG ACGGAGCTGT GGTTCTACGC CGTTACCGGC
ACCGGCATGG CGACGCTGAT CCTCGGCTCG GTGATCGCGC TCTTCCGACA CGACCTCAAG
GGGCTGCTGG CCTACTCCAC CATCGGCCAC CTCGGTCTTA TCACGGCGCT GGCGGGCATC
GGCACGCCGC TTGCGATCCT CGCGGCGATC TTCCACATCG CCAATCACGC GCTCTTCAAG
GCCTCGCTCT TCATGGCGGC GGGCATCATC GACCACGAGA GCGGGACGCG CGACATGCGC
CGACTGTCGG GCCTGATCCG GCTGATGCCC GTGACCGGGA CCCTCGCCAT CGTGGCGGCG
GCGGCCATGG CCGGGGTGCC GCTGCTGAAC GGGTTCCTGT CCAAGGAGAT GTTCTTCGCG
CAGGCGGTGG ATTGGCACAA CGGCACCTGG CTCGACGTCT CGTTGCCGTG GCTTGCGACC
TTCGCCGGCA TCTTCTCGGT CGCCTATTCG CTGCGCTTCA TCGCCACCGT CTTCTTCGGG
CCGCCACCCG TCGGTCTGCC ACGCACCCCG CACGAGCCCA AGCCCTGGAT GCGCCGGCCG
GTCGAACTGC TGGTGGCGCT CTGCCTGCTG GTGGGCATCC TGCCGGGCCT GACACTGGGG
CCGACGCTGA ACCTCGCTGC CCGTGCGGTG GTGGGCGAAG CCCTGCCCGA TACCTCGATC
GCGATCTGGC ACGGGGTCAA TGCGCCCCTC GTCATGAGCC TCGTGGCGCT GCTGCTGGGG
GTGGGGCTGC ATGTGCTGCT CGGCTCCCGC ATCGGCGCGG GCCCCGAGGG GCCGCCGCTC
CTGCACCGGC TGCGGGCGCA GAAGATCTAC GAGTGGCTCC TGCTGCGCCT GAGCTGGATC
TGGCCGCGGA TGATCCTGGA ACTGGCGGGG ACCGAGCGGC TGCAGCCGCA GTTGCGCCTT
CTGGTGCTGC TGGCGCTCGC GGTCGGGGTC ACGACGCTCT GGGGCAGCCT CTGGCCCATC
GAGGCCGCAC GCCAGACGCC GCTGAGCGCC GGTTTCGTGC TGATGTGGGT GGTGGGCGTG
GCCTGCGCCC TCGGAGCCGC ATGGCAGGCC AAGTATCATC GCTTTGCGGC GCTGGTGCTG
CTGGGAGGCG CGGGGCTCGT GACCTGCCTG ACCTTCGTCT GGTTCTCGGC CCCCGATCTG
GCGGTGACGC AGCTTCTGGT CGAGATCGTG ACCACGGCGC TGCTGCTGCT GGGGCTGCGC
TGGCTGCCCA AGCGGCGCGA GGAGATCGCC GAGGACAAGC TGCTGCCCGC CCGCCTCCGC
CGCGGCCGGG ACCTTGTCAT TGCGGGCCTG TCGGGCGCGG GTCTGGCGGT CCTCGCCTAT
GTGGTGATGA CCCGGCCGCT GATCCCCAAC ATCGGCGACT GGTTCCTGCG CAACGCCTAT
CATGAAGGCG GCGGCACCAA CGTCGTGAAT GTCATCCTCG TCGATTTCCG CGCCTTCGAC
ACGTTCGGCG AGATCACCGT GCTCGCCATC GTGGGACTGA CGGTCTATGC GCTGCTGCGC
CGCTTCCGCC CCGCCCCGGA AAGCGTGGCG CTGCCCGACG AGCAGCGCGG CGAGGAGGAG
AGGGCGCTGC GCGCCTACCT GACCGTGCCG GCTGTCATCA TGCAATGGAT GTTCCCGGCG
CTGATCGTGC TGTCGGCCTA CCTGTTCCTG CGCGGCCACG ACCTGCCGGG CGGAGGCTTC
TCGGCCGGCG TCACGCTGGC AATCGCCTTC CTGCTGCAGT ACCTGGCCAC CAACGTCCGC
TGGATCGAAA CGCGGCTGAC GGTGCTGCCG ATCCGCTGGA TGGGCGCGGG GCTGCTGATC
GCGGGCACCA CGGGGATGGG GGCGTTCCTC TTCGGCTATC CATTCCTGAC CGCCCATTCC
CGCTATGTCG AGCTGCCGCT GGTCGGGCCC GTGCCGGCGG CGACGGCGCT GCTGTTCGAT
CTGGGTGTCT ATGCGCTGGT GGTGGGGGCG ACCGTGATCA TGCTCATCGC CATCGCGCAC
CAGTCGCTGC GCTCGGTCCG CCTGCGCGAG CAGGAGGCCG AGGATGCCGC CCGCAAGGAG
GCCGCCTGA
|
|---|
| Protein sequence | MIEQNLLLIL VSLPFMGALA AATLPVNAHN AAAWISGLVL GGSLLVLASL HGVVARGEVL
RVGIDWVPLI GLTLDFRLDG FAWMFVTLVM AIGGLVVLYA RYYLSKTDPV PRFYSFLMAF
TGAMIGILLS GNILMLVVFW ELTSILSFLL IGYWHQAQTA RDGARTALVV TATGGLCLLA
AMLLLGQIVG SYDLDAVLAS GEAIRTHQAY PLVLALFLIG AFTKSAQFPF HFWLPGAMAA
PTPVSAYLHS ATMVKAGVFL LVRFSPALGG TELWFYAVTG TGMATLILGS VIALFRHDLK
GLLAYSTIGH LGLITALAGI GTPLAILAAI FHIANHALFK ASLFMAAGII DHESGTRDMR
RLSGLIRLMP VTGTLAIVAA AAMAGVPLLN GFLSKEMFFA QAVDWHNGTW LDVSLPWLAT
FAGIFSVAYS LRFIATVFFG PPPVGLPRTP HEPKPWMRRP VELLVALCLL VGILPGLTLG
PTLNLAARAV VGEALPDTSI AIWHGVNAPL VMSLVALLLG VGLHVLLGSR IGAGPEGPPL
LHRLRAQKIY EWLLLRLSWI WPRMILELAG TERLQPQLRL LVLLALAVGV TTLWGSLWPI
EAARQTPLSA GFVLMWVVGV ACALGAAWQA KYHRFAALVL LGGAGLVTCL TFVWFSAPDL
AVTQLLVEIV TTALLLLGLR WLPKRREEIA EDKLLPARLR RGRDLVIAGL SGAGLAVLAY
VVMTRPLIPN IGDWFLRNAY HEGGGTNVVN VILVDFRAFD TFGEITVLAI VGLTVYALLR
RFRPAPESVA LPDEQRGEEE RALRAYLTVP AVIMQWMFPA LIVLSAYLFL RGHDLPGGGF
SAGVTLAIAF LLQYLATNVR WIETRLTVLP IRWMGAGLLI AGTTGMGAFL FGYPFLTAHS
RYVELPLVGP VPAATALLFD LGVYALVVGA TVIMLIAIAH QSLRSVRLRE QEAEDAARKE
AA
|
|---|
| |