Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3578 |
Symbol | |
ID | 5085730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 467843 |
End bp | 468526 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640485136 |
Product | hypothetical protein |
Protein accession | YP_001169752 |
Protein GI | 146279594 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCG TCCGTGCGGT GATCTTCGAC CTCGACGGCT GCCTGGTGGA CAGCGAGCCG CATTCCCTTG CGGCACTTGT GGGCGAGATG CAGACCATCG GCCTGCCCCG GACGACCGTG GAGGAGGTGC GCGAGCGGTT CCTCGGCGTC TCGATGGCCG ACATCTGCCG CGACATCGAG CGGCGCACCG GCGGCCCGGT GCCCGCGGAT TTCATCGACC GGGTCGAGGC GCGGCTGTTT CGGGCCTATG CCTTGCGGCT GCGGCCAATG GCGGGGGCGG ATCGGCTGCT CGACCGGCTG GAGGTAGCGG GGCTCGCGAT GGCCATCGCG ACCGGCGGCT CGGTCCGGCG GATGCACGAG ACGCTGCGCC TCGGGGGGCT TGCCTCGCGC TTTGCCGGGC GCGCCTTCAG CGCCGACGAG GTGCCGCGCG GCAAGCCCGC GCCCGACCTG TTCCTCAAGG CCGCCGCCGT GCTGGGCGTG CCGCCCGACC GCTGCGCCGT GCTCGAGGAT TCACCGCACG GGATCGCCGG CGCGTGCGCC GCGGGGATGC GCGCCGTGGG CTTCACAGGG GGCAGCCATC TCGAGGGGCT TCAGGCGGCC CATCGGGGGC TGCTGCTCGA GGCCGGCGCT TCGCAGGTGG TCGGGCGGCT CGACGAGGCC TTCGCCGCCC TCTGCGGGCC CTGA
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Protein sequence | MSPVRAVIFD LDGCLVDSEP HSLAALVGEM QTIGLPRTTV EEVRERFLGV SMADICRDIE RRTGGPVPAD FIDRVEARLF RAYALRLRPM AGADRLLDRL EVAGLAMAIA TGGSVRRMHE TLRLGGLASR FAGRAFSADE VPRGKPAPDL FLKAAAVLGV PPDRCAVLED SPHGIAGACA AGMRAVGFTG GSHLEGLQAA HRGLLLEAGA SQVVGRLDEA FAALCGP
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