Gene Rsph17025_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3578 
Symbol 
ID5085730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp467843 
End bp468526 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID640485136 
Producthypothetical protein 
Protein accessionYP_001169752 
Protein GI146279594 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG TCCGTGCGGT GATCTTCGAC CTCGACGGCT GCCTGGTGGA CAGCGAGCCG 
CATTCCCTTG CGGCACTTGT GGGCGAGATG CAGACCATCG GCCTGCCCCG GACGACCGTG
GAGGAGGTGC GCGAGCGGTT CCTCGGCGTC TCGATGGCCG ACATCTGCCG CGACATCGAG
CGGCGCACCG GCGGCCCGGT GCCCGCGGAT TTCATCGACC GGGTCGAGGC GCGGCTGTTT
CGGGCCTATG CCTTGCGGCT GCGGCCAATG GCGGGGGCGG ATCGGCTGCT CGACCGGCTG
GAGGTAGCGG GGCTCGCGAT GGCCATCGCG ACCGGCGGCT CGGTCCGGCG GATGCACGAG
ACGCTGCGCC TCGGGGGGCT TGCCTCGCGC TTTGCCGGGC GCGCCTTCAG CGCCGACGAG
GTGCCGCGCG GCAAGCCCGC GCCCGACCTG TTCCTCAAGG CCGCCGCCGT GCTGGGCGTG
CCGCCCGACC GCTGCGCCGT GCTCGAGGAT TCACCGCACG GGATCGCCGG CGCGTGCGCC
GCGGGGATGC GCGCCGTGGG CTTCACAGGG GGCAGCCATC TCGAGGGGCT TCAGGCGGCC
CATCGGGGGC TGCTGCTCGA GGCCGGCGCT TCGCAGGTGG TCGGGCGGCT CGACGAGGCC
TTCGCCGCCC TCTGCGGGCC CTGA
 
Protein sequence
MSPVRAVIFD LDGCLVDSEP HSLAALVGEM QTIGLPRTTV EEVRERFLGV SMADICRDIE 
RRTGGPVPAD FIDRVEARLF RAYALRLRPM AGADRLLDRL EVAGLAMAIA TGGSVRRMHE
TLRLGGLASR FAGRAFSADE VPRGKPAPDL FLKAAAVLGV PPDRCAVLED SPHGIAGACA
AGMRAVGFTG GSHLEGLQAA HRGLLLEAGA SQVVGRLDEA FAALCGP