Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3575 |
Symbol | |
ID | 5085727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 462142 |
End bp | 463944 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485133 |
Product | hypothetical protein |
Protein accession | YP_001169749 |
Protein GI | 146279591 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.656903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGACA ACAGCGAAAA CCTGGCGCTT GCCGCGCTGG TTGCGGAACT GGAGCGTGCG CTGGTGGCGC AGGATGCCGC GGCGGTGGCC GACTGCTTCC TCGAGACCGG CTTCTGGCGC GATCTGGCCG CCTTCACCTG GAACATCAAG ACCTGCGAGG GCAAGGGTCA GATCGGCGAC ATGGCCGCGG CGCAGCTTGC GGCCATCGCG CCGCAGGCGC TGGCGCTCGA CCCGGGCGAG CTGGTGACGG CGGCGGATGG GGTCACGGAG GGCTGGCTGA CCTTCGAGAC CGCGACGGGG CGCGGCACCG GGCATATCCG CATGAAGGAC GGCAAGGTCT GGACGCTGCT GACCGCGCTC CATGAGCTGA AGGGCCACGA GGAGCCGCGC CGCCTGCGTC GTCCGATGGG CGCCGAACAT GGCCATGATG CGAACCGCAA GACCTGGAAG GAGAAGCGCG AGGACGAGGC GAAGCGGCTG GGCACCGAGG AGCAGCCTTA CGTGCTGATC ATAGGCGGCG GTCAGGGCGG CATCGCGCTC GGGGCGCGGC TGCGGCAGCT CGGCGTGCCC ACGATCATCG TCGAGAAGAA CGAGCGGCCC GGCGACAGCT GGCGGCGGCG CTACAAGTCG CTCTGCCTGC ATGACCCGGT CTGGTATGAC CACCTGCCCT ACATCCCCTT CCCGGACAAC TGGCCGGTCT TCGCGCCCAA GGACAAGATC GGCGACTGGC TGGAAATGTA TACCAAGGTC ATGGAGCTGA ACTACTGGTC CTCGACCACG GCAAAATCCG CGCGCTACGA CGAGGCCGCG CAGGAATGGA CCGTGGTGGT GGAGCGGAAC GGCGAGGAGA TCACGCTGCA CCCGAAGCAG CTGGTGCTGG CCACCGGCAT GTCGGGCAAG GCCAATGTGC CGGTGATCCC GGGACAGGAC ATCTTCCAGG GCGAGCAGCA GCATTCCAGC CAGCACCCCG GCCCGGACGC CTATCGGGGC AAGAAGGTGG TGGTGATCGG CTCGAACAAC TCGGCGCATG ACATCTGCGC CGCGCTGTGG GAGGGCGGAG CGGATGTCAC GATGGTGCAG CGCTCCTCGA CCCATATCGT GAAGTCGGAC AGCCTGATGG AGGTCTGCCT CTCGGGCCTC TATTCCGAAC AGGCGGTGGC GAACGGCATC GACCACGAGA AGGCCGACAT GATCTTCGCC TCGGTTCCCT ACCGGATCAT GGCCGACTTC CACGTCCCGC AATACGAGGA GATCCAGCGC CGCGACGCAG ACTTCTACGC CGCGCTGGAA AAGGCGGGCT TCATGCTCGA CTTCGGCGAC GACGGCTCGG GGCTGTTCAT GAAATACCTG CGCCGCGGCT CGGGCTATTA CATCGACGTG GGCGCCTGCG ATCTGGTGAT CGACGGCTCG ATCAAGCTGA AGTCGGGTTC GGACGTGAGC CACCTGACCG AGACCTCGGT GGTGCTGCGG GACGGCACCG AGCTTCCGGC CGATCTGGTG GTCTATGCCA CCGGCTACGG CTCGATGAAC GGCTGGGCGG CGGATCTGAT CAGCCCCGAG GTCGCGGACA AGGTCGGCAA GTGCTGGGGT CTGGGGTCCG ACACGACGAA GGACCCCGGC CCGTGGGAGG GCGAGCAGCG CAACATGTGG AAGCCCACCA TGCAGGAGGG GCTCTGGTTC CACGGCGGCA ACCTGCACCA GTCGCGGCAC TACTCCCGCT ATCTGTCCTT GCAGCTGAAG GCGCGGCAGG CGGGCATCCC GACCCCGGTC TGGGGCCTGA CGCCGCCGCA TCATCTGAAG TGA
|
Protein sequence | MLDNSENLAL AALVAELERA LVAQDAAAVA DCFLETGFWR DLAAFTWNIK TCEGKGQIGD MAAAQLAAIA PQALALDPGE LVTAADGVTE GWLTFETATG RGTGHIRMKD GKVWTLLTAL HELKGHEEPR RLRRPMGAEH GHDANRKTWK EKREDEAKRL GTEEQPYVLI IGGGQGGIAL GARLRQLGVP TIIVEKNERP GDSWRRRYKS LCLHDPVWYD HLPYIPFPDN WPVFAPKDKI GDWLEMYTKV MELNYWSSTT AKSARYDEAA QEWTVVVERN GEEITLHPKQ LVLATGMSGK ANVPVIPGQD IFQGEQQHSS QHPGPDAYRG KKVVVIGSNN SAHDICAALW EGGADVTMVQ RSSTHIVKSD SLMEVCLSGL YSEQAVANGI DHEKADMIFA SVPYRIMADF HVPQYEEIQR RDADFYAALE KAGFMLDFGD DGSGLFMKYL RRGSGYYIDV GACDLVIDGS IKLKSGSDVS HLTETSVVLR DGTELPADLV VYATGYGSMN GWAADLISPE VADKVGKCWG LGSDTTKDPG PWEGEQRNMW KPTMQEGLWF HGGNLHQSRH YSRYLSLQLK ARQAGIPTPV WGLTPPHHLK
|
| |