Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3569 |
Symbol | |
ID | 5085721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 455740 |
End bp | 456288 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485127 |
Product | hypothetical protein |
Protein accession | YP_001169743 |
Protein GI | 146279585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.549682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAA CCCTTGCGGC AGCGCCGGCC CGGTCGGGCG GCAATGCCTT CATCCGAACG GTCCATGCCA TCTCGACCGT CTGCGGCTGG ACCGCCGCGG CCTTCACGGT GATCGCGCTG TTCGTGACCT GCCACATGAT CTTTGTCCGC GCGGTGCTGA ACCAGTCCAC GATCTGGCAG ACCGAGGCGG TGATCTACCT GATGATCGCG GCCACGACCG TCGGCCTGCC CTACGTCCAG CGCCTGCGGG GGCATGTGAA CGTCGATCTC GTGCCCCACA TGCTGCCGCG GCGCGTGCGG CGCGTGCTGG CCTATGTCGT GCTGATCTCG ACCATTGCCG TGATGGCGGT GCTGGCCTGG TATGCGTTCG ACGTCTGGCA TCAGGCCTTC GACCGCAACT GGAAGTCCTC GACCGTCTGG GCCGCGCCGC TGTGGGTGCC CTATCTGGCG ATGCCCGTGG GCTTCGGCCT CTTCATCCTG CAACTGGTGG CGGATCTGGT GGGGCTCATC ACCGGCGCCG AGCCGCCCTT CGGCATCGAG GACCATTGA
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Protein sequence | MSGTLAAAPA RSGGNAFIRT VHAISTVCGW TAAAFTVIAL FVTCHMIFVR AVLNQSTIWQ TEAVIYLMIA ATTVGLPYVQ RLRGHVNVDL VPHMLPRRVR RVLAYVVLIS TIAVMAVLAW YAFDVWHQAF DRNWKSSTVW AAPLWVPYLA MPVGFGLFIL QLVADLVGLI TGAEPPFGIE DH
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