| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3568 |
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| Symbol | |
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| ID | 5085720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 454427 |
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| End bp | 455740 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640485126 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001169742 |
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| Protein GI | 146279584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.655855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGC TTGTTCTCGG CCTTCTCGTG GCCGTCGTCA CCATCATCGT CCTGTTCTCG
GGCGTCTCGG TGGCCGTGGG GCTGCTGATC GTCTCGGCCG TGTTCCTGCT GATCTTCGAC
GGGGCGCGCT CGCTCGAGAT GATGCCCGAG ATCTTCTTCG CCGATCTCAA CAGCTTCACC
ATCCTGTCGA TCCCGATGTT CATCATCATG GGCGCGGCCA TTGCCTCGAC CCGCGCGGGG
GCCGACCTCT TCGAGGCGCT GGAACGCTGG CTGACGCGCG TGCCCGGCGG GCTGGTCGTC
TCGAACCTCG GGGCCTGCGC GCTCTTTGCG GCCATGTCGG GCTCCAGCCC GGCCACCTGC
GCGGCCATCG GCAAGATGGG CATCCCCGAG ATGCAGAAGC GCGGCTATCC CGACGGCGTC
GCCGCGGGCG CCATCGCGGC CGGCGGCACG CTGGGCATCC TGATCCCGCC CTCGGTCACG
CTGATCGTCT ATGGCATCGC CACCGAGACC TCGATCGGCC GGCTGTTCCT GGCCGGGATC
ATCCCGGGGC TCCTTCTGAC CCTGCTCTTC ATGGCCTGGG CCATCTTCGC CACCTGGCGT
TCGGGCAACA CGGCCGTGCT GTCGCCGCGC CATTACAGCC TGCGCGAACG GTTCGAGATC
CTGCCCCGCG TGGTGCCCTT CCTCGTGGTG ATCGCGGGCG TGCTCTATGC CATGTACGGC
GGCATCGCCA CGACGTCCGA GACGGCGGCG GTGGGCGCGG TGCTCTGCCT CGTGATGGCG
ATCGTCATCT ACGGGCTCTG GAAGCCGCGG GCGATCTGGG GCGTGCTGCG CGACAGCACC
CGCGAAAGCG TGATGATCCT CTTCATCATG GCCGCGGCGG GGGTCTTTGC CTACATGATG
TCCTCGCTCT TCATCACCCA GTCCATCGCG CAGTGGATTG CCGAGCTGGA CGTCAACCGC
TGGGTGCTGA TGGGGCTCAT CAACCTCTTC CTGCTGGTTG CCGGCTTCTT CCTGCCGCCG
GTCGCGGTGA TCCTGATGAC GGCGCCGATC CTGCTGCCGA TCCTGCAGGC CGCGCAGTTC
GACCCCTACT GGTTCGCCAT CATCCTGACG ATCAATATGG AGATCGGGCT GATCACTCCG
CCGGTGGGCC TGAACCTGTT CGTCATCAAT TCCATCTCGC CCAACATCTC GCTCCGCACG
ATCCTGTGGG GCTCGGCACC CTTCGTCGGA TGCATGATCG CGGCCATCGT GATCCTCTGT
TTCGTGCCCG AGCTGGTCAC ATGGCTGCCG GATCTGGTGA TGGGCCCGGT TTGA
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| Protein sequence | MDPLVLGLLV AVVTIIVLFS GVSVAVGLLI VSAVFLLIFD GARSLEMMPE IFFADLNSFT
ILSIPMFIIM GAAIASTRAG ADLFEALERW LTRVPGGLVV SNLGACALFA AMSGSSPATC
AAIGKMGIPE MQKRGYPDGV AAGAIAAGGT LGILIPPSVT LIVYGIATET SIGRLFLAGI
IPGLLLTLLF MAWAIFATWR SGNTAVLSPR HYSLRERFEI LPRVVPFLVV IAGVLYAMYG
GIATTSETAA VGAVLCLVMA IVIYGLWKPR AIWGVLRDST RESVMILFIM AAAGVFAYMM
SSLFITQSIA QWIAELDVNR WVLMGLINLF LLVAGFFLPP VAVILMTAPI LLPILQAAQF
DPYWFAIILT INMEIGLITP PVGLNLFVIN SISPNISLRT ILWGSAPFVG CMIAAIVILC
FVPELVTWLP DLVMGPV
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