Gene Rsph17025_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3552 
Symbol 
ID5085704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp440109 
End bp440921 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID640485110 
Producthypothetical protein 
Protein accessionYP_001169726 
Protein GI146279568 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.60541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TTCTTCCCCA CATGATCCTC GGGCTCGGCG CGGCGCTGAT ACTGCTGCCG 
TTCTACTGGA TGGTGCTGAC CTCGATCCGC TCTCCAGCCG AGATCTTCGA TATTTCGCTC
TGGCCGATCC CACAGCATTT CAGCGCCGCG CAGAACTACG GCCAAGCGGC GAACACGGTG
CCGATGGCGC AGTTCATGCT GAATGGCATC ATCGTCTGCG GCGGCATCCT GATCGTGCAG
ATCCTGACGG CGGTTCCGGC CGCCTATGCT CTCGCAAAGC TGCGATTTCC GGGCCGGCGC
CTCTTGATGG CGCTGGTCAT CGGCGCGCTC TGCATCCCGA TGCAGGCCCT GGCGCTGCCG
CTCTTCGTCG GGCTCGCGCG CGCCAACCTT CTGAACACCT ATTTCGCGCA GATGATGCCG
TTCTTCCTGT CGGTCTTCGC GATCTTCCTG TTCCGCCAAT CGTTCCGATC CTACCCCGAC
GAGATCATCG AGGCCGCCCG CATGGACGGC TTCACCGAGA TGGAGATCTG CTGGCGCCTC
GTCCTGCGCG GCTCTCTGCC CTCGCTGGCG GCCTTCACGG TCTTCTCGGT CGTGGCGCAT
TGGAACGACC TCTACTGGCC GCTGATCGTC GTGTCCGACA TGGCGATCGC CCCGCCGCCC
CTGGGCATGC TGTTCTTTTC CGATGTCGAG TCGGGCGCGA ACTACGGCGC GCTGATGGCG
GGCGCGGCCA TGATCACCGC TCCGATGATC CTCTGCTTCC TGCTGGCCAG GCGCAGCTTC
ATCACGGGCA TCACCATGAC CGGGGTCAAG TAG
 
Protein sequence
MLRILPHMIL GLGAALILLP FYWMVLTSIR SPAEIFDISL WPIPQHFSAA QNYGQAANTV 
PMAQFMLNGI IVCGGILIVQ ILTAVPAAYA LAKLRFPGRR LLMALVIGAL CIPMQALALP
LFVGLARANL LNTYFAQMMP FFLSVFAIFL FRQSFRSYPD EIIEAARMDG FTEMEICWRL
VLRGSLPSLA AFTVFSVVAH WNDLYWPLIV VSDMAIAPPP LGMLFFSDVE SGANYGALMA
GAAMITAPMI LCFLLARRSF ITGITMTGVK