Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3552 |
Symbol | |
ID | 5085704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 440109 |
End bp | 440921 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640485110 |
Product | hypothetical protein |
Protein accession | YP_001169726 |
Protein GI | 146279568 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.60541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA TTCTTCCCCA CATGATCCTC GGGCTCGGCG CGGCGCTGAT ACTGCTGCCG TTCTACTGGA TGGTGCTGAC CTCGATCCGC TCTCCAGCCG AGATCTTCGA TATTTCGCTC TGGCCGATCC CACAGCATTT CAGCGCCGCG CAGAACTACG GCCAAGCGGC GAACACGGTG CCGATGGCGC AGTTCATGCT GAATGGCATC ATCGTCTGCG GCGGCATCCT GATCGTGCAG ATCCTGACGG CGGTTCCGGC CGCCTATGCT CTCGCAAAGC TGCGATTTCC GGGCCGGCGC CTCTTGATGG CGCTGGTCAT CGGCGCGCTC TGCATCCCGA TGCAGGCCCT GGCGCTGCCG CTCTTCGTCG GGCTCGCGCG CGCCAACCTT CTGAACACCT ATTTCGCGCA GATGATGCCG TTCTTCCTGT CGGTCTTCGC GATCTTCCTG TTCCGCCAAT CGTTCCGATC CTACCCCGAC GAGATCATCG AGGCCGCCCG CATGGACGGC TTCACCGAGA TGGAGATCTG CTGGCGCCTC GTCCTGCGCG GCTCTCTGCC CTCGCTGGCG GCCTTCACGG TCTTCTCGGT CGTGGCGCAT TGGAACGACC TCTACTGGCC GCTGATCGTC GTGTCCGACA TGGCGATCGC CCCGCCGCCC CTGGGCATGC TGTTCTTTTC CGATGTCGAG TCGGGCGCGA ACTACGGCGC GCTGATGGCG GGCGCGGCCA TGATCACCGC TCCGATGATC CTCTGCTTCC TGCTGGCCAG GCGCAGCTTC ATCACGGGCA TCACCATGAC CGGGGTCAAG TAG
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Protein sequence | MLRILPHMIL GLGAALILLP FYWMVLTSIR SPAEIFDISL WPIPQHFSAA QNYGQAANTV PMAQFMLNGI IVCGGILIVQ ILTAVPAAYA LAKLRFPGRR LLMALVIGAL CIPMQALALP LFVGLARANL LNTYFAQMMP FFLSVFAIFL FRQSFRSYPD EIIEAARMDG FTEMEICWRL VLRGSLPSLA AFTVFSVVAH WNDLYWPLIV VSDMAIAPPP LGMLFFSDVE SGANYGALMA GAAMITAPMI LCFLLARRSF ITGITMTGVK
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