Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3535 |
Symbol | |
ID | 5085687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 423997 |
End bp | 426444 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640485094 |
Product | hypothetical protein |
Protein accession | YP_001169710 |
Protein GI | 146279552 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.115476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGCA TTGGCCTTTC CGAACGAGAC ATCTGCTCCC AGCGGATCAC GCCCGCCATC ATTCAGGCCG GCTGGGACCT CTCAACCCAG ATCAGGGAGG AGGTCAGTTT CACGAAGGGC CGCATCATCG TCCGCGGCAA GCTGGTCAGC AGGGGCAAGG GAAAGCGTGC CGACTACATC CTGTCCGTGC GCCCGAACAT TCGCCTCGCG GTCGTCGAGG CGAAGGACAA TGGTCATGCT GTTGGCGCGG GAATCCAGCA GGCGCTCGAA TACGCCGAAA CGCTGAACCT ACCCTTCGCG TTCTCCTCGA ACGGTGAGGG CTTCGTCTTC CACGACCGGA CCGGCCTGAG CCCAACGCCG GAGCGGCTTC TGACACTCGA TGAATTTCCG TCGCCGGCCG AACTCTGGCA ACGGTACTGC GAGTGGAAGG GTCTGGATGC CGGGGCGAGC CAGGTCACCC TGCAGGAGTA TCATGACGAC GGCAGCGGCA AGGAACCGCG GTACTACCAG ATCAACGCCG TGAACGCCGC AATTGAAGCA ATCGCGCGCG GCAATCGCCG CGTGCTGCTC GTCATGGCCA CCGGCACCGG CAAGACCTAC ACCGCATTCC AGATCATCTG GCGCTACCGG CAAGCCTTCC CCGGCAAGCG CGTTCTGTTC CTCGCCGATC GCAACGTGCT GATCGACCAG ACCATGGTCA ACGATTTCCG GCCATTCTCG GGCAAGATGG CCAAACTCTC TACTCAGGCC AAGACCATCG AACGCGCCGA CGGGAGCACC GTCGACCTTC CGCTCGGGCT CGACCGCAAG CGGCGGATCG ACCCGTCCTA CGAGATCTAC CTGGGCCTCT ATCAGGCGAT CACCGGCCCT GCGGAAGAGG ACAAGATCTT CCGCGAGCTC TCCAGGGATT TCTTCGACCT CATCATCATC GACGAATGTC ACCGCGGCAG TGCGGCCGAG GACTCAGCCT GGCGAGAGAT CCTCGACCAT TTCTCGGGCG CGGTGCAGAT CGGTATGACG GCCACTCCCA AGGAAACCGA ATACACCTCG AACATCGCCT ACTTTGGCGC ACCAGCATAC AGCTACACGC TGAGGCAGGG CATCCGCGAC GGCTTCCTGG CACCGTACAA GGTAATCAAG GTCCACATCG ACCGTGACGT TCAGGGCTAC CGCCCCGAGG CAGGGCAACT CGACCGAGAC GGGCAGGAGG TCGACGACCG TATCTACAAC ATCAAGGATT TCGACCGCAC ACTGGTGCTC GACGACCGGA CCGTCCTCGT GGCGAGAAAG GTGACCGAGT TCCTGAAGGA AAGCGGCGAT TGGATGGCGA AGACCATCGT CTTCTGCGTC GATCAGGAAC ACGCGGCCCG GATGCGCCAA GCCCTGATCA ACGAGAACGC CGACCTGGTG GCGCAGAACT CCCGCTACGT CATGCGCATC ACCGGCAACG ACAAGGAAGG ACTCGACCAG CTCGGGAACT TCATCGATCC GGAAGTGGCC TATCCCGTCA TCGTCACCAC TTCCCGGCTG CTCTCGACCG GTGTGGATGC CCAGACCTGT CGCCTTATCG TGCTCGATCG CGAGGTCGGC TCGATGACCG AGTTCAAGCA GATCGTCGGT CGCGGCACAC GGGTACACGA GGACACCGGC AAGTTCTACT TCACGCTGAT GGATTTCCGG GGCGCAACGA ACCATTTCGC GGACCCCGCC TTTGATGGCG AACCGGTTCA GATCTACGCT CCGACTGATA CCGACCCGAT CACGCCACCG GAGGACGTGC CGCCAGCGGG CGACGAGGAT GATCCGATCC CGCCCGTTCC CGGGGCGGAC GAGACTGTCG TCCAGGATCC GGGTTGGACG GACGCCGGTC CCCGGAAGCC CCTCCGCAAG ATCTACGTCG ACGGGGTTGG CGCCCTGATC ATCGCCGAAC GGGTCGAATA TCTCGACGAA CATGGCAGGC TGATCACCGA GTCCTTGCGC GACTACACCC GCAAGGCGCT GAAACGGCGC TTCGCCAGCC TCGACGATTT CCTGAAGCGC TGGAAGACGC AGGAGAAGAA GCAGGCCGTT GTCGAGGAAC TCGAAGCCGA GGGCCTGCCG CTCGACGTGA TCGCGCAGGA ACTGGGGCGG GATCTCGATC CCTTCGACCT GATCTGCCAC ATCGCCTTTG ACGCCAAGCC GTTGACCCGG CGCGAGCGTG CCGACGGCGT GAGGAAGCGC GACGTGTGGG GCCGGTATGG CGACACCGCC CGCGCCGTCC TCGACGCCCT GCTCGACAAG TACGCCGATG ATGGACTCCT CGACTTCGAC GACCCCAAGA TCCTGAAAAT CAACCCGTTC TCCCAGATGG GAACCGAGGT TGAACTCATC CGGGCTTTCG GCAAGAAGCA GGACTATCTG AAGGCCATGC ATGACTTGCA GGCCGCCCTC TACGAAGAAA GCGCCTGA
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Protein sequence | MDSIGLSERD ICSQRITPAI IQAGWDLSTQ IREEVSFTKG RIIVRGKLVS RGKGKRADYI LSVRPNIRLA VVEAKDNGHA VGAGIQQALE YAETLNLPFA FSSNGEGFVF HDRTGLSPTP ERLLTLDEFP SPAELWQRYC EWKGLDAGAS QVTLQEYHDD GSGKEPRYYQ INAVNAAIEA IARGNRRVLL VMATGTGKTY TAFQIIWRYR QAFPGKRVLF LADRNVLIDQ TMVNDFRPFS GKMAKLSTQA KTIERADGST VDLPLGLDRK RRIDPSYEIY LGLYQAITGP AEEDKIFREL SRDFFDLIII DECHRGSAAE DSAWREILDH FSGAVQIGMT ATPKETEYTS NIAYFGAPAY SYTLRQGIRD GFLAPYKVIK VHIDRDVQGY RPEAGQLDRD GQEVDDRIYN IKDFDRTLVL DDRTVLVARK VTEFLKESGD WMAKTIVFCV DQEHAARMRQ ALINENADLV AQNSRYVMRI TGNDKEGLDQ LGNFIDPEVA YPVIVTTSRL LSTGVDAQTC RLIVLDREVG SMTEFKQIVG RGTRVHEDTG KFYFTLMDFR GATNHFADPA FDGEPVQIYA PTDTDPITPP EDVPPAGDED DPIPPVPGAD ETVVQDPGWT DAGPRKPLRK IYVDGVGALI IAERVEYLDE HGRLITESLR DYTRKALKRR FASLDDFLKR WKTQEKKQAV VEELEAEGLP LDVIAQELGR DLDPFDLICH IAFDAKPLTR RERADGVRKR DVWGRYGDTA RAVLDALLDK YADDGLLDFD DPKILKINPF SQMGTEVELI RAFGKKQDYL KAMHDLQAAL YEESA
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