Gene Rsph17025_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3513 
Symbol 
ID5085929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp397870 
End bp398787 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID640485072 
Producthypothetical protein 
Protein accessionYP_001169688 
Protein GI146279530 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.808023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CAAAAATGAA GCAGCGCGTC GTGCGCCACT CTCGCTCGCG CGGCGCGGGC 
AGCCCGGATG TCTGGGGCAT CTACGAGCCG GACACAGGCT CGATCCAGTA TGTCTGCGCC
GATCCCTCGA CCCGGCAGGC GGCGCTGATC GACGTGGTAT GGAACTTCGA TCCCCAGCAT
TACCGCTTTT CCACCGAGAG CGTGGATCAG GTGCTGGACC TCGTGAAACG GGAGCGGCTG
CGCGTGGCCT GGGTGCTCGA CACCCATCCG CACGCCGATC ACATGATGGC TTCGGCTCTG
TTGAGAGAGC GCACCGGCGC CCCCAATGCC ATCGGCGCCA GGGTGGAGGA CATCGCCCGG
ATCTGGGCCG GCATCTACAA CCTCCCGGAT GCCTTCAACC CTCGGCGCGA CTTCGACCGG
CGGTTCAGCG CGGGCGAGAC CCTTGCGCTG GGGGATCTCG GGATGCGGGT GATGCTGTCG
CCCGGCCATA CGCTCGGCTC GATCACCCTG GTCTGCGGCG ATGCCGCCTT CACCCATGAC
ACGCTGATGC AGCCCGATGT GGGCACCTCG CGCGCCGACT TTCCGGGCGG CAACGCGGCC
GAGCTGTGGG AGTCGATCCA GTCCATCCTC ACCCTGCCCT GCGACACGCG CCTCTTCGTC
GGCCACGATT ATGGCGCCGA GGAGCGGGAC GAGCCGATGT GGGAGGCGAC CGTTGCCGAG
CATCGGGCGG GAAACGTGCA TGTGCGCGAC GGGACGGACC GCGACGAGTG GATCGCCCTC
CGCGAGGCGC GCGACCGCAC CCTGCCCTTG CCGGACCGCA TCCTTGCCGC CATGCAGATC
AACCTCCGCG GCGGACGCCT GCCCCCGGCC GAGACCGACG GGCGGCACTT CCTGAAGCTG
CCGGTCAACC GCTTCTGA
 
Protein sequence
MSESKMKQRV VRHSRSRGAG SPDVWGIYEP DTGSIQYVCA DPSTRQAALI DVVWNFDPQH 
YRFSTESVDQ VLDLVKRERL RVAWVLDTHP HADHMMASAL LRERTGAPNA IGARVEDIAR
IWAGIYNLPD AFNPRRDFDR RFSAGETLAL GDLGMRVMLS PGHTLGSITL VCGDAAFTHD
TLMQPDVGTS RADFPGGNAA ELWESIQSIL TLPCDTRLFV GHDYGAEERD EPMWEATVAE
HRAGNVHVRD GTDRDEWIAL REARDRTLPL PDRILAAMQI NLRGGRLPPA ETDGRHFLKL
PVNRF