Gene Rsph17025_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3506 
Symbol 
ID5085922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp389262 
End bp390314 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID640485067 
Producthypothetical protein 
Protein accessionYP_001169683 
Protein GI146279525 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.194292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.455844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT TCGTGGGTCT TGATGTGTCG CTCGACGAGA CGCACATCTG CGTCGTCGAC 
GAAGGCGGTC GCATCGTCAA GGAGACACGC GCTGCGAGCG AGCCGAAGGC GATTGCCAAG
GCTATCCGGC ACCAGGACCG GCGCATCGAG CATGTCGGCC TCGAAGCCGG AAACCTTTCC
CAGTGGCTCC ACGAGGGGCT TGTCCGCGAG GGGTTCTCTG TCTCGGTGAT GGAGGCGCGT
CACGTCCGAG CGGCCTTCGC CGCGATGCGC GTCAAGACCG ATCGCCATGA CGCCCGCGGC
ATCGCCCAGC TCGTGCGCCT TGGCTGGTTC AAGCGCGTAC ACGTGAAGTC GCTGACCGCC
CAGGAGACCC GCGTTCTGCT CACCGCGTGC ACCTTCCTCA TAGAAAAAGT GACGGCGACG
GAGAACTCGC TCCGCGCCGC GCTGAGGACC TTCGGGCTGA AGATGGGATC TGTGACGCGG
AAGACGTGGG AGGCCCGGGC GCGCGAACTT GCCGACGGAA ACCCGCTCCT CGAGGGCATC
GTGGACGCCA TGTTGCGGGT GCGAGCCCTG CTCCTTGACG AACTTGCCAG CCTCGACGGC
CAGCTCATGG CACTCGCGAA GTCCGATCCC GTGACACGGC TGCTGATGAC GACCCCGGGT
GTGGGCGTGA TCGTGGCGCT GACCTTCCGA AGTGCCGTCG ATGACCCGGA CCGCTTCCCA
CGCAGCAGGG ATGTTGGCGC CTGGGCGGGA CTGACCCCGC GAAGGTGGCA ATCGGGCAAG
ACTGATATCG CCGGACGGAT CACCAAGGCC GGTGATCCGC GGGTGCGCGT CATGCTCTTC
GAGGCCGCGG CGAGCATTCT CGGGCGGGCG CGGGTCATGT CGCCCTTGAA GTCCTGGGGT
TTGAGGATCG CGAAACGGAC ATCAATGAAG AAGGCGATCG TTGCCGTGAG CCGCAAGCTC
GCAACGATCC TGCTGGCGAT GTGGAAGTCC GGAACCGCAT ACTGGGCGGC GGGTCGGCCA
CCAGCCTCGG CCCAGGACCT CGCAGCAGCA TGA
 
Protein sequence
MEFFVGLDVS LDETHICVVD EGGRIVKETR AASEPKAIAK AIRHQDRRIE HVGLEAGNLS 
QWLHEGLVRE GFSVSVMEAR HVRAAFAAMR VKTDRHDARG IAQLVRLGWF KRVHVKSLTA
QETRVLLTAC TFLIEKVTAT ENSLRAALRT FGLKMGSVTR KTWEARAREL ADGNPLLEGI
VDAMLRVRAL LLDELASLDG QLMALAKSDP VTRLLMTTPG VGVIVALTFR SAVDDPDRFP
RSRDVGAWAG LTPRRWQSGK TDIAGRITKA GDPRVRVMLF EAAASILGRA RVMSPLKSWG
LRIAKRTSMK KAIVAVSRKL ATILLAMWKS GTAYWAAGRP PASAQDLAAA