Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3476 |
Symbol | |
ID | 5085892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 355091 |
End bp | 355747 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640485041 |
Product | hypothetical protein |
Protein accession | YP_001169657 |
Protein GI | 146279499 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.184573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCAAGT TCATCGACGA CCATCGAAGG GAACACGGGG TCGAGCCGAT CTGCGACGTG CTGCCGATCG CCCCATCCAC CTGCTACGAT CATCTGGCGA AGCGGGCCGA TGCGTCGCGG CGGTCGGATC GTGCGGGTCG GGATGAAGAA CTGCAGCCCG AGATCAGACG CGTCTTCGAC GAGAACTGGC GAGTCTACGG CGTCCGGAAG ATCTGGCGGC AGTTGCGGCG TGAGGGCTTT GACGTGGCCC GATGCACGGT CGCCCGGCTA ATGAAGAGCA TGGATATTCA GGGCATTATC CGAGGCAAGC CGCATAGGAC GACAATCCCG GACAAGAAGC AGCCGTGTCC GCTGGGCAAG GTGAACCGCC AGTTCCGCGT GTCAGCGCCC AACATGCTAT GGGTGTCGGA TTTCACCTAT GTCGCCACCT GGAAGGGGTT CGTCTATGTC GCCTTCGTCA TCGACGCCTA TGCCCGCAAG ATCGTTGGCT GGCGCGTCAG CAACTCGGCG CATGCGGGGT TCGTCCTCGA TGCCCTGGAA CAGGCGGTGC ATGACCGTCG CCCAGCCAAG GGCATAGGGC TGGTTCACCA CAGCGACAGG GGCAGCCAGG GCGGATTCAA CCGGTCGTCG CAACACGTTC GATCGTATCC ATTTTGA
|
Protein sequence | MVKFIDDHRR EHGVEPICDV LPIAPSTCYD HLAKRADASR RSDRAGRDEE LQPEIRRVFD ENWRVYGVRK IWRQLRREGF DVARCTVARL MKSMDIQGII RGKPHRTTIP DKKQPCPLGK VNRQFRVSAP NMLWVSDFTY VATWKGFVYV AFVIDAYARK IVGWRVSNSA HAGFVLDALE QAVHDRRPAK GIGLVHHSDR GSQGGFNRSS QHVRSYPF
|
| |