Gene Rsph17025_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3476 
Symbol 
ID5085892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp355091 
End bp355747 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content62% 
IMG OID640485041 
Producthypothetical protein 
Protein accessionYP_001169657 
Protein GI146279499 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.184573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGT TCATCGACGA CCATCGAAGG GAACACGGGG TCGAGCCGAT CTGCGACGTG 
CTGCCGATCG CCCCATCCAC CTGCTACGAT CATCTGGCGA AGCGGGCCGA TGCGTCGCGG
CGGTCGGATC GTGCGGGTCG GGATGAAGAA CTGCAGCCCG AGATCAGACG CGTCTTCGAC
GAGAACTGGC GAGTCTACGG CGTCCGGAAG ATCTGGCGGC AGTTGCGGCG TGAGGGCTTT
GACGTGGCCC GATGCACGGT CGCCCGGCTA ATGAAGAGCA TGGATATTCA GGGCATTATC
CGAGGCAAGC CGCATAGGAC GACAATCCCG GACAAGAAGC AGCCGTGTCC GCTGGGCAAG
GTGAACCGCC AGTTCCGCGT GTCAGCGCCC AACATGCTAT GGGTGTCGGA TTTCACCTAT
GTCGCCACCT GGAAGGGGTT CGTCTATGTC GCCTTCGTCA TCGACGCCTA TGCCCGCAAG
ATCGTTGGCT GGCGCGTCAG CAACTCGGCG CATGCGGGGT TCGTCCTCGA TGCCCTGGAA
CAGGCGGTGC ATGACCGTCG CCCAGCCAAG GGCATAGGGC TGGTTCACCA CAGCGACAGG
GGCAGCCAGG GCGGATTCAA CCGGTCGTCG CAACACGTTC GATCGTATCC ATTTTGA
 
Protein sequence
MVKFIDDHRR EHGVEPICDV LPIAPSTCYD HLAKRADASR RSDRAGRDEE LQPEIRRVFD 
ENWRVYGVRK IWRQLRREGF DVARCTVARL MKSMDIQGII RGKPHRTTIP DKKQPCPLGK
VNRQFRVSAP NMLWVSDFTY VATWKGFVYV AFVIDAYARK IVGWRVSNSA HAGFVLDALE
QAVHDRRPAK GIGLVHHSDR GSQGGFNRSS QHVRSYPF