| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3465 |
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| Symbol | |
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| ID | 5085881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 342043 |
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| End bp | 345096 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640485030 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001169646 |
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| Protein GI | 146279488 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0968249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0910855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGC CGAACCTGTC GGAATGGGCG CTGCGCAGCC GGCAGCTGAC GATCTACATG
ATGATCGTCA CGGTGATCGC GGGCGCCTTC GCCTTCATCA ACCTCGGCCG GGACGAGGAC
CCCAGCTTCA CCATCAAGAC GATGCTGGTC ACCGCCGTCT GGCCCGGCGC CACGCTGGAG
GAGACCCAGA CCCAGCTGAC CGACCGGCTG GAGCGGCAGT TGCAGGAAAC CACCGGGCTG
GACGCGCTGC GCTCGATCAC GCGGCCGGGG ATCGTGACGA TCTACGTCGA TCTCGAGGTG
GCCTTTCCCC CCGAACGCGT TCCCGAAGCC TGGCAGGAGG TGCGAAACGC GGTCGGCGAC
ATCGCGCACA CGCTGCCTCA GGGCGTGCTG GGGCCGTTCT TCAACGACAA CTTCGGCGAT
GTCTTCGGCA TCATCTACGC CTTTACCGCC GACGGCTTCA GCGACCGCGA GTTGCGCGAC
GAGGTCAATG TCGTGCGCTC GACGCTGCTG CGCGAGGTGC CGGCCATCTC GAGGATCGAC
TGGCTCGGCG TGCAGGACGA GCAGGTGCTG CTCGAGTTCC AGCCCGACCG GGTTGCCGCC
ATGCAGCTGG ACTATGCCGC GATCTTCAAC GCGGTGGCCG CGCAGAACGT GGTGCGCCCG
GCGGGCGTCG TCACCACCGC GCAGGAAAAC ATCGCCCTGC GCGTCTCGGG CTCGTTCGAG
ACCGACGCCG ACCTGCTCGA CGTGTCGCTG GTGGCGGACG GGCGGATGAT CCGGCTGGGC
GACATCGCCT CGGCGCGGCG CACGCTGTCC GACCCGCCCC AGCCCCTGCT GCGCGTCAAC
GGTCAGCGCG CCATCGCACT TGCGATCTCG ATGCGCGAGG GGGGCGACAT CCTCGATCTG
GGAACCCGCG TCACGGCCGC CATGTCCGAG GCTTTGGCCA ATCTGCCCAT CGGGATCGAG
CCGATCCTGA TCTCGAACCA GCCCGCCGTG GTCGAGCAGG CGATCGGCGA GTTCACCACC
TCGCTCTGGC AGACGGTGGC CATCATCCTG ACGGTCAGTT TCCTGATGCT CGGTGTGCGA
CCGGGCGCGG TGGTGGCCAT TGCGATCCCG GTGACGCTGG CGGGCGTGTT CCTCGTGATG
CAGACCCTGC AGATCGACCT GCACCGGGTC TCGCTCGGGG CGCTGATCAT CGCGCTGGCG
CTTCTGGTGG ACGACGCCCT GACCACGGTG GACGCGATGC TGCGCCGGCT GGCGGCGGGC
GACACGCTAA AGACCGCCGC GACCTTCGCC TACCGCAGCC TTGCCGCGCC CATGCTGACG
GGGACGCTGA TCACCATCGC GGGCTTCGTG CCGATCGGCT TCGCCGAGAG CACGGCGGGC
GAATACACGA TCTCGCTCTT CCTTGTCGTG GGGATCGCGC TGATCGCCTC GTGGCTGGTG
GCCGTGCTCT TCACGCCGAT CATCGGCTCG GTGCTGCTCA AGGCGCCCGC CACCGGCACG
GCCGAGCCCG GCCCGGGGCG GATCATGCGG GGCTACCAGC GGTTCCTCGG ACAGGCGATC
CGGTTCCGCT GGCTGACCTT CGCGGTCACG GCGGGACTGT TCGCGCTGGC CTGGGTGGGC
CTCTCGCGGG TGGACCGGCA GTTCTTCCCC GCCTCGGACC GCAACGAGCT GATCGTCGAT
TTCCAGCTTC CGCGCTCGTC CTCGATCCTC GCCAGCGAGG ATGCCGTGGC GCGGATCGAG
GCGTTCATCG CCGGTTCGGG CGAGGCGCAG TCCTGGACCT CCTACGTCGG GCGGAACGTG
ATCCGCTTTT ACCTCTCGCT CGACATCCGG CCGCCCAGCG ATCACCAGTC GCAGATCGTG
GTGATGACGA AGGACTTCGC CGCGCGCGAG CGTCTCGAGG TCGCGCTCGA GGACTGGCTG
GGCGACGCCT TCCCCGAGGC GATCAGCCGG GTCAGCCCCC TGCAACTGGG CCCCGTCACC
GGATGGCCGG TGCAGTATCG CCTGAGCGGG CCGGACATCG AGGTCCTGCG CGCCCGCGCG
CTGGATCTGG CCGGCATCGT CGCCAGCGAA CCGGCCACGC GCCACATCCA TTTCGACTGG
ATCGAGCCGG CGCGACAGGT GCGCATCGAC GTCGATCAGG ACCGCGCCCG CCGTCTCGGG
CTGACCAGCG CTCAGCTGGC GGCGGTGCTC GACACCGCCG TGAGCGGCAC CGCCATCAGC
CAGCTGCGCG ACGACATCTA CCTGATCCCG ATCGTCGCGC AGGCGGCGGC CGGCGACCGC
CTCTCGCTCG ACCGGCTCGA GACGCTGCAG GTGCCGGTGC CGGGCGGGCG CACGGTGGCG
CTGGGGCAAT TCGCCAACAT CACCTTCCGG CAGGAGCAAC CCTTCCTCTG GCGGCGCGAC
CGGCTGCCGA CGCTCACGGT CCTTGCGGAT GTAGCGCCGC AGGCTACGCC CGAGGCCGTG
GTTGCGGCCC TTGCGCCGCA GATCGCCGAG ATGAACGACG CGCTGCCGTC GGGATACGAG
GTCGAGGTCG GCGGCACGGT CGAGACCAGT GCCGAAAGCC AGGATTCGGT GTTCGCGGTC
GTGCCGTTGA TGCTCTTCAT CATGATCGCG CTGCTGATGA TCCAGCTCCA GAGCTTCCGC
GACGCCGGCA TGGTGCTTCT GCTGCTGCCG CTTGGCCTGA TCGGGGTGGT GGGAACGCTG
CTGGCCTTCG GCCGCCCGCT GGGGTTCGTC GCGATCCTCG GGATTCTCGC GTTGATCGGG
ATGATCGCGA AGAACGCGGT GATCCTGATC ACACAGATCG ATGCGGAGCG CAGCGCGGGC
TTCGGCGTCA GGGATAGCGC GATCCGGGCC GCCACGAACC GCGCCCGTCC GCTGCTGCTG
ACGGCGCTTT CCACCGTGCT CGGCCTTCTG CCCATCGCGC CCACCCTGTT CTGGGGGCCG
ATGGCCTTCG CGATCATGGG CGGCCTTCTG GTGGCCACGC TTCTGACCCT GATCTTCCTG
CCCACGCTCT ATGTCGCGCT TTGCGGCGAC GACGCCGATG CCGTCCCTGC CTGA
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| Protein sequence | MIGPNLSEWA LRSRQLTIYM MIVTVIAGAF AFINLGRDED PSFTIKTMLV TAVWPGATLE
ETQTQLTDRL ERQLQETTGL DALRSITRPG IVTIYVDLEV AFPPERVPEA WQEVRNAVGD
IAHTLPQGVL GPFFNDNFGD VFGIIYAFTA DGFSDRELRD EVNVVRSTLL REVPAISRID
WLGVQDEQVL LEFQPDRVAA MQLDYAAIFN AVAAQNVVRP AGVVTTAQEN IALRVSGSFE
TDADLLDVSL VADGRMIRLG DIASARRTLS DPPQPLLRVN GQRAIALAIS MREGGDILDL
GTRVTAAMSE ALANLPIGIE PILISNQPAV VEQAIGEFTT SLWQTVAIIL TVSFLMLGVR
PGAVVAIAIP VTLAGVFLVM QTLQIDLHRV SLGALIIALA LLVDDALTTV DAMLRRLAAG
DTLKTAATFA YRSLAAPMLT GTLITIAGFV PIGFAESTAG EYTISLFLVV GIALIASWLV
AVLFTPIIGS VLLKAPATGT AEPGPGRIMR GYQRFLGQAI RFRWLTFAVT AGLFALAWVG
LSRVDRQFFP ASDRNELIVD FQLPRSSSIL ASEDAVARIE AFIAGSGEAQ SWTSYVGRNV
IRFYLSLDIR PPSDHQSQIV VMTKDFAARE RLEVALEDWL GDAFPEAISR VSPLQLGPVT
GWPVQYRLSG PDIEVLRARA LDLAGIVASE PATRHIHFDW IEPARQVRID VDQDRARRLG
LTSAQLAAVL DTAVSGTAIS QLRDDIYLIP IVAQAAAGDR LSLDRLETLQ VPVPGGRTVA
LGQFANITFR QEQPFLWRRD RLPTLTVLAD VAPQATPEAV VAALAPQIAE MNDALPSGYE
VEVGGTVETS AESQDSVFAV VPLMLFIMIA LLMIQLQSFR DAGMVLLLLP LGLIGVVGTL
LAFGRPLGFV AILGILALIG MIAKNAVILI TQIDAERSAG FGVRDSAIRA ATNRARPLLL
TALSTVLGLL PIAPTLFWGP MAFAIMGGLL VATLLTLIFL PTLYVALCGD DADAVPA
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