Gene Rsph17025_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3456 
Symbol 
ID5085872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp331333 
End bp332373 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content74% 
IMG OID640485022 
Producthypothetical protein 
Protein accessionYP_001169638 
Protein GI146279480 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0917683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCCAT CCTTCACGCT CGCCGATCTC GGCTGGGCTT CCGATTTCCT GCGCCAGCTC 
GACCTCGACG AGCTTTCCGC CACCCCCTGC CGCATCGCGG CCGTCCACCG CAGCCGCGTC
GAGGCGCTCA CGGCCGCCGG TCCCCTGTCG CTCACCCCGC CCCCCGGCCT CTCCACCGGC
GAGATCGCCG TGGGCGACTG GGCGCTGACC GACGGTGTGC GGCTGCTGCG GCTCCTCGAC
CGGCGCAGCA GCCTGTCGCG CCGCGCGGCG GGCACCGCGG CCGCGCGGCA GCTGATCGCC
GCCAATGTCG ACACGCTCTT CGTCGTCACC TCCTGCAACG CCGACTTCAA CCCGGCGCGG
CTGGAGCGTT ACCTCGCGCT AGCCCGCGCC GCGGGGGTGG AGCCCGTGAT CCTGCTCACC
AAACCCGATC TCGCACCCGA TCCCGAGGCC TGGCGTGAGC GCGCCGAGGC GATCGACCCG
CGCGTCGCCG TGCGCCTGAT CGACGCGACA GGGCCGGAGG TGCGCGCCGC GCTCGCCGAC
TGGTGCCGTC CGGGCCAGAC GGTGGCGCTG GCGGGCTCGT CCGGCGTCGG CAAGACCACG
CTCGCCAATG CGCTCACCGG CGCGGCGGAG GCCACGGCGC CGATCCGAGA GGACGACGCC
AAGGGGCGCC ACACCACGAC GGGACGGCAC CTGCGGCCCA TCACCGGCGG CGGCTGGCTG
ATCGACACGC CCGGCATGCG CGAGTTGCGC CTGACCGACG CGGGCGAGGG CATCGCCGCC
GTCTTCGACG ATATCGACGC GCTGGCCCGC GCCTGCCGCT TTGCCGACTG CACGCACGGA
AACGAGCCGG GCTGCGCCGT GCGGGCGGCG CTGGCCGAGG GGCGGCTCGA TCCCGGCCGC
CTCGCGCGGT GGGAGAAGCT CAAGCGCGAG GACCGGCACA ACTCAGCCAC GCTCGCCGAG
GCGCACGCCC GGGACCGCGC CTTCGGCCGC ATGGTGCGCG AGGTGCTGCG CGACAAGAAC
CGCCGTCGCA GCGATTTCTG A
 
Protein sequence
MTPSFTLADL GWASDFLRQL DLDELSATPC RIAAVHRSRV EALTAAGPLS LTPPPGLSTG 
EIAVGDWALT DGVRLLRLLD RRSSLSRRAA GTAAARQLIA ANVDTLFVVT SCNADFNPAR
LERYLALARA AGVEPVILLT KPDLAPDPEA WRERAEAIDP RVAVRLIDAT GPEVRAALAD
WCRPGQTVAL AGSSGVGKTT LANALTGAAE ATAPIREDDA KGRHTTTGRH LRPITGGGWL
IDTPGMRELR LTDAGEGIAA VFDDIDALAR ACRFADCTHG NEPGCAVRAA LAEGRLDPGR
LARWEKLKRE DRHNSATLAE AHARDRAFGR MVREVLRDKN RRRSDF