| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3406 |
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| Symbol | |
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| ID | 5086067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 282326 |
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| End bp | 283933 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640484972 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169588 |
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| Protein GI | 146279430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCCAT TGCGCTCGAC TGACGCTCCG ACCCCCCTCC GTTCGTATCG TCGGAACAAC
CTTTCGTATC AAGGCGAGAA GTTGCCGGTT CCACCGCACC GTCGGCGGAA TGCAGACCAT
CTACGTCGAA CGGACAAAGT TCACCGATTT GCAACGCCAA CCGTCCACAT TATGCCCGCC
CGCGCACTAA TGTGGAAAGG TAGCCAATTG GCGTACACTA GAATTGTAGA GAACCTTGTT
CTCACTTCGA CCCTGCGACT CGAGGGGCCG GAGTGGGACA ATACGCTCGT CCGCAACGTC
ACGATCAAGG ACGTCAAGGG CGACGGCCTG ATGCTGCGCA ATGTCAGCAA CGTGCGGATC
GAGAACGTCA CGATCGAGAA TGTCAGCGGC ACCGGGATCA AGCTGAGCAA GACCGGCTCG
ACCCGGAACG TCGAGATCGT GGACAGCACG ATCAACGGCA CCGGCCGCGA CGGCATCAAC
TCGGGCGAAG CGACGGGTGT CGATCATGTC GGCCTGAAGA TCATCGGCAA CACGATCTCG
AACACGGGGC TGGACGGCGG CTCGAGCGGG CTCCTGCACG GCATTTACCT GCAGAGCTCG
GAGTTCCTGG TCGAGGACAA CATCCTCATC AACAGTCACG ACGGCAACGC CATCTCGGTG
CGCAGCTCCG GCATCGTGCG CGGCAACCAC ATCGACGGCG CCTACAAGAG CGGCATCGCC
TATTACGCCG ACCATCCCGC TGGCGCGAGC AACAAGCTGG TGATCGAGGA CAACGTGGTC
GTCGATGCCG GCAAGGGGGG CGCGCGCGGG GACATCAACC TGCTGAACCT GCCCGGCGGC
AGCGATCCGG TGGACACGAT CATCGTGCGC AACAACACGC TGTCGGGTGA GAAGGGCGTC
GTCATCGACG CGGACTATGC CGCGAAGAAA ATCGCGACCA CGTCCACGGG CAACGTGACC
GTCAGCGAGG CCGAGGCGCG CCGCATCATG GACCAGGACG ATCAGGGACC GGCCGGGGCC
TCTCCGCCGG AAACCGTCCG GCCCTCCGAG CCGAGCCAAC CCGACGTGCC GAACCAGCCT
GACGACGTGC AGGAGGGTCG CGTAGGCCTG TCGCTCTCCG GCGTGGGCAC GCGCACCAAG
GTCGAGATGA CCCGCGACGA CGTTCTTGCC GAGACCGTGT CGGCGGCGAG GCAGAAGATC
GCTGCGGCAA ACCTCGATGA GATCGACGTC CGGATCACCG CAACCAAGAA CGGGGCGGCC
GCCTCGCTCG GCATCGACAG CGGTCGTCTC GGCGTCGCGA GTGCGGGTGA GACGTCTGCC
GATGCCAGCC AGATCCTCGG CAGCGAGTCG ATGGTCTTCG ACTTTTCGAA GCAGCCTGGC
GAAGTGGTCG ATGTTACGAT CGACCTCCTC CTGCAGGGAA CGGCCGTGGT GACAGGCTAT
CGGGATGGCG TGGCGATCGG AACGCAGACC GTCAGGGGCA CAAGCGTATC GTTCAGCGAC
GACGAGGGCT TCGACAGGCT GGTCCTGTCG GCGGGAACGT CCAAGACGGG CATTTCGGTC
ACCGGCTTCG AGGCCGAGTA TAGATATGAT GACAGCTATC TGATCTGA
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| Protein sequence | MSPLRSTDAP TPLRSYRRNN LSYQGEKLPV PPHRRRNADH LRRTDKVHRF ATPTVHIMPA
RALMWKGSQL AYTRIVENLV LTSTLRLEGP EWDNTLVRNV TIKDVKGDGL MLRNVSNVRI
ENVTIENVSG TGIKLSKTGS TRNVEIVDST INGTGRDGIN SGEATGVDHV GLKIIGNTIS
NTGLDGGSSG LLHGIYLQSS EFLVEDNILI NSHDGNAISV RSSGIVRGNH IDGAYKSGIA
YYADHPAGAS NKLVIEDNVV VDAGKGGARG DINLLNLPGG SDPVDTIIVR NNTLSGEKGV
VIDADYAAKK IATTSTGNVT VSEAEARRIM DQDDQGPAGA SPPETVRPSE PSQPDVPNQP
DDVQEGRVGL SLSGVGTRTK VEMTRDDVLA ETVSAARQKI AAANLDEIDV RITATKNGAA
ASLGIDSGRL GVASAGETSA DASQILGSES MVFDFSKQPG EVVDVTIDLL LQGTAVVTGY
RDGVAIGTQT VRGTSVSFSD DEGFDRLVLS AGTSKTGISV TGFEAEYRYD DSYLI
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