Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3404 |
Symbol | |
ID | 5086065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 279658 |
End bp | 281031 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640484970 |
Product | hypothetical protein |
Protein accession | YP_001169586 |
Protein GI | 146279428 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.386077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACTGG CGCAGCGGGT CGGGGTGCTT TGGGTGCTTT TGACCTTCCT TGCCACGTCG GGCAGCGGGG TTGCGGCCGG AACCATCGAC CTCAGCCGGC TCGTCGTTGA GCCAAACCCG CGTATCGGTC TTTCCTTCCC CGGCTCGCAG GTCCGTTACT ATCCCTACAT GGCCAAAGCC GGTGTCGGCG TTGCGCGGAT CGCCGTCACC TGGCAGTTGA TCGAACCGGA GCGCGGTCGC TTCAACTGGC GCGGCCTTGA CGAGCGCGTG GGCGCGTTGC TCGCCCTCGG GATCCAGCCG TTCCTGACCT TCGAGTCGAA ATCCGACTGG GGTACGCGGC CCGAGACCTC CAAGGTCAAG AACGGCGACC CGATCGACCT CGGTCTGTGG ACGCGCTTCG TCGGTCAGGT GGTCGAACGT TACGATGGTG ATGGCCGGGA TGACATGCCC GGGCTGAAGG GGCGCGTCGT CTTTTATCAG GCCGCGAACG AATGGGAGAG CCCGACGAAC CCCTCGGGCG GGTGGATCGG CTCGGGCGCG TCGCTGATCG CCTATGTCAA CGCCACGCAC GACGCCGTGA AGGCTGCCGA TCCGCAGGCG ATCTTCGTTC TCGGAGGGGT CGCGTCCTTC AATCTGGATG TCCTGCTTGT CGCGCTCGAC CGTGCGGATT TCCGGGTTCA GCAACGCTGG AGCGACACCT CCACCACGGT CTTTGACCGC GAGCGGATCA AGAGCCCCGA TATCAGGGCC CTGATCGACG AGCGGGTGAT GCCGGTGCTG CGCGAGGCGC GCTACGATGT TGCGGATGCC CATCTCTACG GCCCCGAAGA TCGCGACGCC GCCCGGCTTG CGCTTCTGGC CGAGTTGAGC GGGCGGCCGG TGATTTCGGC GGAATGCGGC GGCCCGTCGC GCGACTACGG GGATGATTAT ACGCCCGAAG GACATTTCGT TGCGGCCGTG CATCGGAACC TGAATGTGCT CGCCGCGGGC GGCGCCTTCT GCCTGTGGTT CCGGCTGGGC GAGGACGACA AGACCACCTG GGGCAACCGC TTCACCGCGC TCTATACCAA TGACGCGCAG CCGAAGCCCG GCGTCTGGGC CTTCCGGCTG CTGGCCCGTC TGCTGGGGCC CGGTGTCGTG CCGCATCCGC TGCCATCGGG CGGCTTCGAG CTGCGCGGAA GCGGTGCGCC TGCGCGTCTC GCCTGGGGGC AGGGTGCAGC CGAGGTGCAG GACTGGGCGC AAAGCGGCGG CACGCCCGCC TGGTGCCTGA GCGATCCCGT CCGGGGGCTG CTCGCGCCGA TGGGCACGGA CTGCGCCGGA GCCTTCATTG TTGCAGGGTC GGACGTGGCC CGGCTGCTTT CTCTTGATCC ATGA
|
Protein sequence | MGLAQRVGVL WVLLTFLATS GSGVAAGTID LSRLVVEPNP RIGLSFPGSQ VRYYPYMAKA GVGVARIAVT WQLIEPERGR FNWRGLDERV GALLALGIQP FLTFESKSDW GTRPETSKVK NGDPIDLGLW TRFVGQVVER YDGDGRDDMP GLKGRVVFYQ AANEWESPTN PSGGWIGSGA SLIAYVNATH DAVKAADPQA IFVLGGVASF NLDVLLVALD RADFRVQQRW SDTSTTVFDR ERIKSPDIRA LIDERVMPVL REARYDVADA HLYGPEDRDA ARLALLAELS GRPVISAECG GPSRDYGDDY TPEGHFVAAV HRNLNVLAAG GAFCLWFRLG EDDKTTWGNR FTALYTNDAQ PKPGVWAFRL LARLLGPGVV PHPLPSGGFE LRGSGAPARL AWGQGAAEVQ DWAQSGGTPA WCLSDPVRGL LAPMGTDCAG AFIVAGSDVA RLLSLDP
|
| |