Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3391 |
Symbol | |
ID | 5086052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 266651 |
End bp | 267193 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484957 |
Product | hypothetical protein |
Protein accession | YP_001169573 |
Protein GI | 146279415 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00597312 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC GCATGACCCT TGCCGCGTGT CTCGTCACGC TTTGCCCGCT GCCCGCGCTC GCCCGCGACG GCATCTTCGA CATTGCCGCG CCCTTCGAGA TCAAGGGCCC CGACCCGTCA CTTTCGGGCG ACATCTTCCT GAAGATGGAT CTCGCCGAGG CCCTGGTGAA TGCCGATGCC GAGGGCCGGC TGCTGCCGGG CCTGTCCGAC CGCTGGGATC AGTCCGACGA CCGGCTGAGC TGGCGCTTCC ACATCCGCTC CGGCGTGCGC TTCCATGACG GGACGCTTCT CACGGCCGAG GTCGCGGCAC AGGCGCTGCG GATTGCGCGC TCGCGCAAGG GGCTGCTGGC GAAGGCCCCC ATCGCCGCGA TCGAGGCCGA GGGCGACGAG GTGGTGATCT CGCTGACCGA GCCCTTCGCG CTTGTGGCGA CGCTTCAGGC CGAGCTGCCG GTGCTGCCAA TCGCCTGGTA TCAGCAGACC GCGGCGGTGG CGCTCGGGGT GACGGCGCGG TCCTCGACCC CTACGAGCGC AGCTTCGGGC TGA
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Protein sequence | MLRRMTLAAC LVTLCPLPAL ARDGIFDIAA PFEIKGPDPS LSGDIFLKMD LAEALVNADA EGRLLPGLSD RWDQSDDRLS WRFHIRSGVR FHDGTLLTAE VAAQALRIAR SRKGLLAKAP IAAIEAEGDE VVISLTEPFA LVATLQAELP VLPIAWYQQT AAVALGVTAR SSTPTSAASG
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