Gene Rsph17025_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3391 
Symbol 
ID5086052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp266651 
End bp267193 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content70% 
IMG OID640484957 
Producthypothetical protein 
Protein accessionYP_001169573 
Protein GI146279415 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00597312 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC GCATGACCCT TGCCGCGTGT CTCGTCACGC TTTGCCCGCT GCCCGCGCTC 
GCCCGCGACG GCATCTTCGA CATTGCCGCG CCCTTCGAGA TCAAGGGCCC CGACCCGTCA
CTTTCGGGCG ACATCTTCCT GAAGATGGAT CTCGCCGAGG CCCTGGTGAA TGCCGATGCC
GAGGGCCGGC TGCTGCCGGG CCTGTCCGAC CGCTGGGATC AGTCCGACGA CCGGCTGAGC
TGGCGCTTCC ACATCCGCTC CGGCGTGCGC TTCCATGACG GGACGCTTCT CACGGCCGAG
GTCGCGGCAC AGGCGCTGCG GATTGCGCGC TCGCGCAAGG GGCTGCTGGC GAAGGCCCCC
ATCGCCGCGA TCGAGGCCGA GGGCGACGAG GTGGTGATCT CGCTGACCGA GCCCTTCGCG
CTTGTGGCGA CGCTTCAGGC CGAGCTGCCG GTGCTGCCAA TCGCCTGGTA TCAGCAGACC
GCGGCGGTGG CGCTCGGGGT GACGGCGCGG TCCTCGACCC CTACGAGCGC AGCTTCGGGC
TGA
 
Protein sequence
MLRRMTLAAC LVTLCPLPAL ARDGIFDIAA PFEIKGPDPS LSGDIFLKMD LAEALVNADA 
EGRLLPGLSD RWDQSDDRLS WRFHIRSGVR FHDGTLLTAE VAAQALRIAR SRKGLLAKAP
IAAIEAEGDE VVISLTEPFA LVATLQAELP VLPIAWYQQT AAVALGVTAR SSTPTSAASG