Gene Rsph17025_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3368 
Symbol 
ID5086028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp245178 
End bp245915 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID640484936 
ProductHupH hydrogenase expression protein 
Protein accessionYP_001169553 
Protein GI146279395 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.536952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.393052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGGCT TCGAAGGATC CTACCTCGGC GCGAACGATC GGATCAGTCC GGCGGCCGTG 
ATGGAATGCA AGGTCTGCTG GACACCCTAT GACCCCGGAC AGGGCGACGA TTTCCGCCAG
ATTCTGCCGG GAACCCCCTT TTCCGCCCTG CCCGAGGACT GGTCCTGCCC GAACTGCTCG
GCTCCGAAAA ACCAGTTCAT GGTCCTGTCC GACCCCGGCT CGTTCATGGC CGACCGCGTG
GCGCGGCTGG TGTCGGATTT CGAGGAGATC TGGCACTCCC GGATGCGCGA CGTGCCGTTG
TCGAACCGTT CGCTGCATGT CGAGGCGGTG GGTTTCATGC TGCACGAGGG GCGGCCCTTG
GGCGTGCTGG TTGCGCCGTG GTTCATGAAC CTGATCCTCC TGCCCGCAGA GGGAGAGGAT
TGGGGCGCGC TGGTTGCGGG TGCGAAGGAG CATGTCCCCT TCCCCTCGGG CAGCTATGAG
TTCATCCACA ATGTCCGGCC GGCGGTCGGC GGCTACAAGG CCTGCTCGCT CTTCTCGCCG
ATGAACGATT TTTCCAGCCA GCTTCAGGCG GTGGAGGTCG CGCGGGCCGT GATGGTGGCG
CTGTTCGATG CGGAGAACCG GGCCGATACC GATCGCGCCG CGGATATCCG CGAGGCGCGC
GAGGCGGAAC TTGCCCCGCC GCCGGCGCCG GAGCCCAGTC GCAGGGCCGT CATCACCGCA
GGCATCGCGG ACGGGTGA
 
Protein sequence
MSGFEGSYLG ANDRISPAAV MECKVCWTPY DPGQGDDFRQ ILPGTPFSAL PEDWSCPNCS 
APKNQFMVLS DPGSFMADRV ARLVSDFEEI WHSRMRDVPL SNRSLHVEAV GFMLHEGRPL
GVLVAPWFMN LILLPAEGED WGALVAGAKE HVPFPSGSYE FIHNVRPAVG GYKACSLFSP
MNDFSSQLQA VEVARAVMVA LFDAENRADT DRAADIREAR EAELAPPPAP EPSRRAVITA
GIADG