| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3362 |
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| Symbol | |
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| ID | 5085853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 240335 |
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| End bp | 241474 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484930 |
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| Product | hydrogenase assembly chaperone hypC/hupF |
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| Protein accession | YP_001169547 |
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| Protein GI | 146279389 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.203707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG CCTCGGAGTT CCGCGACCCG ACGCTGGCGA AGTCGCTGAT TGCCGCCATC
TCGGCGCAGG CCGACCGGCT CGGCGCCCGC CGGGAACGGC CGGTGCACAT CATGGAGATC
TGCGGCGGCC ACACCCATGC GATCTTCCGC TACGGCCTCG ACAAGCTGGT GCACGAGGGG
ATCGAGTTCA TCCACGGCCC CGGCTGCCCG GTCTGCGTCC TGCCCATGAG CCGGGTGGAC
GAATGCATCG CGATCGCCGA GCGGCCGGAG GTGATCTTCA CCACCTTCGG CGATGCGATG
CGCGTGCCGG GAACGCGGGG CTCGCTTCTG CAGGCCAAGG CGCGGGGGGC CGACATCCGC
ATGGTCTATT CGCCGCTCGA CGCGCTGGAA CTCGCGCGGC GCAATCCGGG GCGCGAGGTG
GTCTTCTTCG GCCTCGGCTT CGAGACCACG ACACCGTCCA CGGCGCTCTC GATCCAGCGG
GCGGCGCGCG AGGATCTGCG CAACTTCAGC GTCTTCTGCA ACCACATCAC GGTGCCCGAG
CCGATCCGGG CGCTGCTCGG CGATCCCGAC ATGATGCTCG ACGGCTTCAT CGGGCCGGGC
CATGTGAGCA TGGTGATCGG CACCCACCCC TACGACTTCA TCCCGCGCGA TTACGGCAAG
CCGATCGTGG TGGCGGGGTT CGAGCCGACC GACCTGCTGC AATCGGTCCT GATGGTGCTG
ACCCAGATCG CCGAGGGCCG GGCGGAGGTC GAAAACCAGT ATGCCCGCGT GGTGCCTGAG
CATGGCAATC CGGCGAGCCT TGCCGCGATC GCGGATGTCT ATGAGCGGCG GCCGAGCTTC
GAGTGGCGGG GTCTGGGCGA GATCGATGCC TCGGGCCTGC GCATCCGCGA AACCTACGCC
GCCTTCGACG CCGAGCGCAG GTTCGGCGTC GGCTATGGCG CAGGCCGGGC GCCCCAGCCA
GAGCCCGAAG GCTGCGCCTG CGGCGCGGTG ATGACGGGGC GGATCAAGCC CACCGCCTGC
CCGCAGTTCG GGCGCGGCTG CACGCCCGAG ATGCCCCTCG GCGCGCTGAT GGTGTCCTCC
GAGGGCGCAT GCGCGGCCTA CTGGCAGTAT GGCGGCGCGC GGGGGCTGGC CGCCGAATAG
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| Protein sequence | MKFASEFRDP TLAKSLIAAI SAQADRLGAR RERPVHIMEI CGGHTHAIFR YGLDKLVHEG
IEFIHGPGCP VCVLPMSRVD ECIAIAERPE VIFTTFGDAM RVPGTRGSLL QAKARGADIR
MVYSPLDALE LARRNPGREV VFFGLGFETT TPSTALSIQR AAREDLRNFS VFCNHITVPE
PIRALLGDPD MMLDGFIGPG HVSMVIGTHP YDFIPRDYGK PIVVAGFEPT DLLQSVLMVL
TQIAEGRAEV ENQYARVVPE HGNPASLAAI ADVYERRPSF EWRGLGEIDA SGLRIRETYA
AFDAERRFGV GYGAGRAPQP EPEGCACGAV MTGRIKPTAC PQFGRGCTPE MPLGALMVSS
EGACAAYWQY GGARGLAAE
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