Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3355 |
Symbol | |
ID | 5085846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 234339 |
End bp | 235385 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640484924 |
Product | hypothetical protein |
Protein accession | YP_001169541 |
Protein GI | 146279383 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0675521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTC TGCTGACGTC GGCGGCGCTG GCGCTGACGG CTCTGGCCGC TCCGGCCGTG GCGCAAGACA TCGTGGATGT GTCGAAGGTC AACCAGGACC TGATCGCCAC CGCCGACGGC AAGGAATACA GCATTGCCAC CGTGGTGAAG GTGGACGGCA TCGCCTGGTT CGACCGGATG CGCGACGGCA TCGACCAGTT CAAGGGCGAC ACCGGCCATG ACGTCTGGAT GGTCGGCCCG AGCCAGGCGG ACGCCGCGGC GCAGGTGCAG CTGATCGAGA ACCTGATCGC GCAGGGGGTC GATGCGATCT GCGTGGTGCC CTTCTCGGTC GAGGCGGTGG AGCCGGTGCT GAAGAAGGCG CGTGACCGCG GCATCGTGGT CATCACCCAC GAGGCCTCGA ACATCCAGAA CACCGACTTC GACCTCGAGG CGTTCGACAA CCTCGCCTAT GGCGCGAACC TGATGAAGGA ACTCGCCAAA TCCATGGGCG AGAAGGGTCA GTATGTCGCC ACCGTCGGCT CGCTCACCTC GAAGAGCCAG ATGGAATGGA TCGACGGCGC GGTGGCCTAC CAGAAGGAGA ACTACCCCGA GATGAGCCTC GTGGGTGATC GTCTGGAAAC CGCCGACGAT GCGGCCATCG ACTACACCAA GCTCAAGGAA GCGATGACCA CCTACCCCGA CATCACCGGG ATCCTCGGCG CGCCGATGCC GACCTCGGCC GGGGCGGGCC GCCTGATCGC CGAGAGCGGG CTGAAGGACA AGGTCTTCTT TGCCGGCACC GGCCTGCCGT CGGTGGCGGG CGAATACCTC CAGAACGGCG ACATCCAGTA CATCCAGTTC TGGGATCCGG CGGTTGCGGG CTATGCGATG AACATGCTGG CCGTGGCGGT GCTCGAGGGC CGGAAGGACG AGATCAAGCC GGGCCTGAAC CTCGGCCTCA CCGGCTATGA GGATCTCACC GCGCCGGACG AGGCCAACCC GCATCTGCTC TATGGCGCGG GCTGGGTCGG CGTGACGAAG GACAACATGG CCGACTACGA CTTCTGA
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Protein sequence | MKILLTSAAL ALTALAAPAV AQDIVDVSKV NQDLIATADG KEYSIATVVK VDGIAWFDRM RDGIDQFKGD TGHDVWMVGP SQADAAAQVQ LIENLIAQGV DAICVVPFSV EAVEPVLKKA RDRGIVVITH EASNIQNTDF DLEAFDNLAY GANLMKELAK SMGEKGQYVA TVGSLTSKSQ MEWIDGAVAY QKENYPEMSL VGDRLETADD AAIDYTKLKE AMTTYPDITG ILGAPMPTSA GAGRLIAESG LKDKVFFAGT GLPSVAGEYL QNGDIQYIQF WDPAVAGYAM NMLAVAVLEG RKDEIKPGLN LGLTGYEDLT APDEANPHLL YGAGWVGVTK DNMADYDF
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