| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3354 |
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| Symbol | |
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| ID | 5085845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 232765 |
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| End bp | 234258 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640484923 |
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| Product | ABC-type xylose transport system periplasmic component-like protein |
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| Protein accession | YP_001169540 |
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| Protein GI | 146279382 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0716508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACA CCCTCATCGA GCTGAGACAC ATCGGCAAGC GCTTTGGCGG CGTGCGCGCG
CTGGACGGCG TGTCGCTGGA GATCCGCCCC GGCGAGATCC ATTGCCTGGC CGGCGAGAAC
GGCTCGGGAA AATCGACCGT CATCAAGGTG ATGTCGGGCA TCTACACGCC GGACGAGGGC
GAGATCCTGA TCGACGGCCG CCCGGTGGGC CGGCTCGACC CGATCCGGGC CGTGCAGCAT
GGCGTGCAGG TGATCTACCA GGACTTCTCG CTGTTCGGAA ACCTGACGGT GGCCGAGAAC
CTCGCGCTCA ACACCTATGT GCTCGAGGGG CGCCGCCGGA TGGACTGGCG CCGCGCCCGC
AGCATGGCGC GCGAAGTGCT GGGCCGGATC GGCGTGGACA TCGACCCCGA TGCCGAAGTG
GGCACGCTGC CCACCTCCGG CCGGCAGATC GTGGCCATCG CGCGCGCGAT CCTGGCCCGC
GCCCGGCTCA TCATCATGGA CGAGCCCACC ACCGCCCTCA CCCGCCACGA GGTCGATGCG
CTCTTTGCCA TCGTCCGCGA CCTGCAGGCC CAGGGCATCG CCGTCCTCTT CGTCAGCCAC
AAGATGCGCG AGATGCTGGA GATTTCCGAG CGGCTGACCG TTTTCCGCAA CGGCCGCAAG
GTGGCCGAGG GGCCGATGGC CGACTTTGAC GAGGCCGCGA TCACCCACGC GATGACGGGC
CTCTCGCTCA CCGACGATCC CTACCGCCCC GACCTGCCGC CGGGTCCGCC GCTGCTCGAG
GTCCGCGGAC TGTCGGTGCC GGGCAGCGTG CAGGGCATCG ACCTGTCGCT CCGCCCCGGC
GAGATCGTGG GCATCTCGGG CCTGATCGGC TCGGGGCGCA CCGAGCTTGC GCGCGCGCTC
TTCGGCATGG AGCCCGCGAT GACCGGCACC ATCCGGCTCG AGGGCCGCGA GGTCCATCCG
CGCTCGGTGC AGGAGGCCAT TGCCTTGGGC ATTGCCTATG TCCCCGAGGA CCGGCTGACC
GAAGGGCTGT TCCTGCCGCA ATCCATCGAG CGCAACCTCG TGGTCTCGAT CCTCGAGCGG
CTGCGCCGCG GGCCCTTCCT CGACCGCGCC GCCGTGCGCG ACAGGACGCT GGGCATGTTC
CGCGACATGC AGATCGCGGC CCCCTCGCCC GAGACGGCGG TGGGCAACCT CTCGGGCGGC
AACGCGCAGC GCGTGATGCT CGGCCGCTGG CTCCTGACCG GCGCGCGCGT GCTGATCCTG
AACGGGCCGA CGGTGGGGGT GGATGTGGGC TCGAAGGCCA CGATCCACCG CATCATCCGC
GACCTCGCGC AGCGCGAGGG GCTCGGGGTG CTGATGATCT CGGACGACGT GCCCGAGCTC
GTCACCAACT GCAACCGCAT CCACGTCATG CACCGTGGAC GCTTCGTCGC CGATCTGGAT
GGGTCCGGGA TGACCGAGGA CCGGATCAAC GATGCCCTCA AGACACTGAA CTGA
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| Protein sequence | MSDTLIELRH IGKRFGGVRA LDGVSLEIRP GEIHCLAGEN GSGKSTVIKV MSGIYTPDEG
EILIDGRPVG RLDPIRAVQH GVQVIYQDFS LFGNLTVAEN LALNTYVLEG RRRMDWRRAR
SMAREVLGRI GVDIDPDAEV GTLPTSGRQI VAIARAILAR ARLIIMDEPT TALTRHEVDA
LFAIVRDLQA QGIAVLFVSH KMREMLEISE RLTVFRNGRK VAEGPMADFD EAAITHAMTG
LSLTDDPYRP DLPPGPPLLE VRGLSVPGSV QGIDLSLRPG EIVGISGLIG SGRTELARAL
FGMEPAMTGT IRLEGREVHP RSVQEAIALG IAYVPEDRLT EGLFLPQSIE RNLVVSILER
LRRGPFLDRA AVRDRTLGMF RDMQIAAPSP ETAVGNLSGG NAQRVMLGRW LLTGARVLIL
NGPTVGVDVG SKATIHRIIR DLAQREGLGV LMISDDVPEL VTNCNRIHVM HRGRFVADLD
GSGMTEDRIN DALKTLN
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