Gene Rsph17025_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3349 
Symbol 
ID5085840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp227744 
End bp228718 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID640484918 
Productribokinase 
Protein accessionYP_001169535 
Protein GI146279377 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.526689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCC ACGCCATGCC CGACAGCCAT CCCCGGAACC CCGGCACCCC CCTCGCGCCC 
GACTGGTTCG AGGAGGTGCA GGTGAACCGC AGCGCCGCCG AGCGCCGCGC GACCAGCCTT
GCCGGCGGCC GCACCGTCAA GAAGGATCAT CAGGCGGCCT GGCTCCTGCG CGCGATCCAG
TGCATCGACC TGACGACGCT TGCGGGCGAC GACACGCCCG GCAAGGTGCG GCGCCTGTGC
GCCAAGGCGC GCCAGCCCGT CCGGCCGGAC CTGCTCGAGG CGATGGGCGT GGCCGACATC
GGCCTGACCA CGGGCGCGGT CTGCGTCTAT CCGACCATGG TTCCCCATGC GGTCGCGGCG
CTGCAAGGCT CGGGCATTCC GGTCGCCTCG GTCGCCACGG GCTTCCCCGC GGGCCTCACG
CCCCTGCCGC AGCGGCTGGC CGAGATCACC TACGCCGTCG AGGCCGGCGC CGCCGAGATC
GACATCGTCA TCACGCGCGA ACATGTGCTG CTCGGCCACT GGTCGGCGCT CTACGACGAG
ATCGCCGCCA TGCGCGAGGC CTGCGGCGAG GCTCACCTCA AGGCGATCCT CGCCACGGGA
GAGCTTGGGA CGCTGACCAA CGTCTACCGC GCCTCGATGG TGGCGATGCA GGCGGGGGCC
GATTTCATCA AGACCTCGAC CGGCAAGGAG ACCGAGAACG CCACCCTGCC CGTCTCTCTC
ACCATGCTGC GGGCGCTGCG CGACTATGGC GAGCGGACGG GGGTCCGCAT CGGCTTCAAG
CCGGCGGGCG GCCTGCGCGC GGCCAAGGAC GCGCTCGCCT GGCTCGCGCT GATGAAGGAG
GAACTGGGCG GGCCATGGCT CAGGCCCGAC CTCTTCCGCA TCGGCGCCTC GACGCTGCTC
GGCGACATCG AGCGGCAGCT CGAGCATCAC GTCACGGGGC GCTATGCCAG CGCCGACCAC
CACGCCCTGA GCTGA
 
Protein sequence
MKAHAMPDSH PRNPGTPLAP DWFEEVQVNR SAAERRATSL AGGRTVKKDH QAAWLLRAIQ 
CIDLTTLAGD DTPGKVRRLC AKARQPVRPD LLEAMGVADI GLTTGAVCVY PTMVPHAVAA
LQGSGIPVAS VATGFPAGLT PLPQRLAEIT YAVEAGAAEI DIVITREHVL LGHWSALYDE
IAAMREACGE AHLKAILATG ELGTLTNVYR ASMVAMQAGA DFIKTSTGKE TENATLPVSL
TMLRALRDYG ERTGVRIGFK PAGGLRAAKD ALAWLALMKE ELGGPWLRPD LFRIGASTLL
GDIERQLEHH VTGRYASADH HALS