Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3349 |
Symbol | |
ID | 5085840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 227744 |
End bp | 228718 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640484918 |
Product | ribokinase |
Protein accession | YP_001169535 |
Protein GI | 146279377 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.526689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCC ACGCCATGCC CGACAGCCAT CCCCGGAACC CCGGCACCCC CCTCGCGCCC GACTGGTTCG AGGAGGTGCA GGTGAACCGC AGCGCCGCCG AGCGCCGCGC GACCAGCCTT GCCGGCGGCC GCACCGTCAA GAAGGATCAT CAGGCGGCCT GGCTCCTGCG CGCGATCCAG TGCATCGACC TGACGACGCT TGCGGGCGAC GACACGCCCG GCAAGGTGCG GCGCCTGTGC GCCAAGGCGC GCCAGCCCGT CCGGCCGGAC CTGCTCGAGG CGATGGGCGT GGCCGACATC GGCCTGACCA CGGGCGCGGT CTGCGTCTAT CCGACCATGG TTCCCCATGC GGTCGCGGCG CTGCAAGGCT CGGGCATTCC GGTCGCCTCG GTCGCCACGG GCTTCCCCGC GGGCCTCACG CCCCTGCCGC AGCGGCTGGC CGAGATCACC TACGCCGTCG AGGCCGGCGC CGCCGAGATC GACATCGTCA TCACGCGCGA ACATGTGCTG CTCGGCCACT GGTCGGCGCT CTACGACGAG ATCGCCGCCA TGCGCGAGGC CTGCGGCGAG GCTCACCTCA AGGCGATCCT CGCCACGGGA GAGCTTGGGA CGCTGACCAA CGTCTACCGC GCCTCGATGG TGGCGATGCA GGCGGGGGCC GATTTCATCA AGACCTCGAC CGGCAAGGAG ACCGAGAACG CCACCCTGCC CGTCTCTCTC ACCATGCTGC GGGCGCTGCG CGACTATGGC GAGCGGACGG GGGTCCGCAT CGGCTTCAAG CCGGCGGGCG GCCTGCGCGC GGCCAAGGAC GCGCTCGCCT GGCTCGCGCT GATGAAGGAG GAACTGGGCG GGCCATGGCT CAGGCCCGAC CTCTTCCGCA TCGGCGCCTC GACGCTGCTC GGCGACATCG AGCGGCAGCT CGAGCATCAC GTCACGGGGC GCTATGCCAG CGCCGACCAC CACGCCCTGA GCTGA
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Protein sequence | MKAHAMPDSH PRNPGTPLAP DWFEEVQVNR SAAERRATSL AGGRTVKKDH QAAWLLRAIQ CIDLTTLAGD DTPGKVRRLC AKARQPVRPD LLEAMGVADI GLTTGAVCVY PTMVPHAVAA LQGSGIPVAS VATGFPAGLT PLPQRLAEIT YAVEAGAAEI DIVITREHVL LGHWSALYDE IAAMREACGE AHLKAILATG ELGTLTNVYR ASMVAMQAGA DFIKTSTGKE TENATLPVSL TMLRALRDYG ERTGVRIGFK PAGGLRAAKD ALAWLALMKE ELGGPWLRPD LFRIGASTLL GDIERQLEHH VTGRYASADH HALS
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