Gene Rsph17025_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3344 
Symbol 
ID5085835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp221056 
End bp222423 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content73% 
IMG OID640484913 
Producthypothetical protein 
Protein accessionYP_001169530 
Protein GI146279372 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.853035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.12735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG GCGCAGGGAT CGGCACCGCG GCCGGCGGGC AAACCGGACA GCGGGTGGTG 
ATCCTCGGCG CCGGGTTCGC CGGGCTTCAG GCGGCCAAGT CGCTTGGCCG GCGGGGCATC
CCGGTCACGG TGATCGACCG GCAGAACCAC CATCTGTTCC AGCCGCTGCT CTATCAGGTT
GCGACCGCCG CCCTGTCGGC GCCCGACATC GCCGAACCGA TCCGCAGCAT CCTGCGCCGC
TACCCGTCGG TCGAGGTGCT TCTGGGCGAC GTGGTCAGGA TCGACACCGG CCGCCGGCAG
GTGCACTGCG CCCACGGCGC GGTGGTGGCG TATGACTGGC TGATCCTGGC GACGGGGGCC
GTCACGGGCT ATTTCGGCCA CGACGACTGG TCGCGCGTCG CGCCGGGGCT GAAGACGATC
GAGGACGCCC GCCGCATCCG CACCCGCGTG CTGATGAGCT TCGAACATGC GGAACGCTGC
ACCGACCCCG AGGAGCGCGC GCGGCTGATG ACCATCGCCG TGATCGGCGG CGGCCCGACA
GGGGTCGAGC TGTCGGGGGC GCTGGCGGAG CTGGCGCGCT TCACCCTCGT GCGCGACTTC
CGCCACATCC GCCCCGATGC GGCGCGTGTG CTTCTGGTCG AGGCCGGGCC GCGGCTGCTC
GGGCCGTTCC AGGAGGCCTC GGCCGACTAT GCCCGCCAGC GGCTGGAGCG GCTCGGCGTC
CGGGTCATGA CCGGGCGCGG GGTCGAGGCG ATCACGGCCG AGAGCCTGAC CCTCGAGGGC
GAGACGCTGC CGGTGGGTCT GGTGATCTGG GCCGCCGGCG TGACGGCCTC GCCGCTGGCG
CGCCAGTTGG GCGAGGTGGA CCGCGGCGGG CGGATCGCGG TGAACGAGCG GCTCGAGGTG
GTGGGGCAGA GCCGGGTTCT GGCGATGGGC GATGTCGCCC TCTGCCCCGG CGAGGACGGC
CGGCCGCTGC CGGGGCTGGC GCAGGTGGCC AAGCAGCAGG GCCAGCATCT CGGCCGCAGC
CTCGGCGCGC ATCTGGCGTC GGGCGCGCCG CTGGAGCCCT TCACCTACCG CAGCTGCGGC
AACACCTCGA TCGTGGGGCG CCATGCCGCC GTCTATGAGA CCGACCGCCA CCGGCTGAGC
GGATGGCCCG CATGGGCGCT CTGGGCGGTG GTGCATGTCT ATCTGCTGGT CGGTTTCCAG
AACCGGATCG TGGTCTCGTT CCAGTGGCTC TGGCGCTATT TGACCTATCA CCGGGGCTCG
CGGCTGATCT CGATGAGCGA GATCGGCCCC GAGGAGGCGG CGACGCTGGG CGAACCCACC
GCCGCCGAGG AGACGCCGGG CGTGAGGGGC GCCGGATCGC GGCCCTGA
 
Protein sequence
MSTGAGIGTA AGGQTGQRVV ILGAGFAGLQ AAKSLGRRGI PVTVIDRQNH HLFQPLLYQV 
ATAALSAPDI AEPIRSILRR YPSVEVLLGD VVRIDTGRRQ VHCAHGAVVA YDWLILATGA
VTGYFGHDDW SRVAPGLKTI EDARRIRTRV LMSFEHAERC TDPEERARLM TIAVIGGGPT
GVELSGALAE LARFTLVRDF RHIRPDAARV LLVEAGPRLL GPFQEASADY ARQRLERLGV
RVMTGRGVEA ITAESLTLEG ETLPVGLVIW AAGVTASPLA RQLGEVDRGG RIAVNERLEV
VGQSRVLAMG DVALCPGEDG RPLPGLAQVA KQQGQHLGRS LGAHLASGAP LEPFTYRSCG
NTSIVGRHAA VYETDRHRLS GWPAWALWAV VHVYLLVGFQ NRIVVSFQWL WRYLTYHRGS
RLISMSEIGP EEAATLGEPT AAEETPGVRG AGSRP