| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3343 |
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| Symbol | |
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| ID | 5085834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 219774 |
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| End bp | 221045 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640484912 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169529 |
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| Protein GI | 146279371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.171785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0446833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGT TCATCGTCAT CGCGCTGATG TTCGCGCTCT TTGCGCTGAA CATGCGCATC
TATCTCGCCA TGTTCGCGGC AGTGGTCGCC TATTTCGTGT TCTTCTCGAC GATCCCGCTG
CCCATCGCGG TGCAGCGTAT CATCTCGCCG ACGCAGAACA CCTCGCTTCT GGCCATTCCG
TTCTTCGTGT TGCTGGGCAC GCTGCTCGGC ACGACGGGAA TCGCGGCGCG GCTGCTGAAG
CTCGCCGACC TGATGGTGGG CCGGCTGACC GGCGGGCTGG GCCATACGAA CGTCATGCTC
TCGACGCTGA TGGGCGGCAT CTCGGCCTCG AACCTCGCCG ACGCCGCCAT GATGTGCCGC
ATCCTCGTGC CCGAGATGCG CCGGCAGGGC TACAGCGCGG GGGCGGCGGC CGCCATCACC
GCCTGCGGCT CGCTGATCAC GCCGATCATC CCGCCGGGGA TCGCGCTGAT CATCTATGCT
CTGGTGGCCG ATGTCTCGAT CGGCGCCATG TTCACCGCGG GCATCCTGCC GGGTCTCCTT
TGCGCGCTGC TGCTGCTGAC CGCGGTCTGG CTCAACGCCC GCTCGAAGGG CCTGCGCCCG
TCGCGCGACA GCTGGCCCAC CGCGCGCGAG ACTCGGCAGA CGCTGCTCGG CGCCTGGCCC
GCGCTTTTTC TCATCGTGGT GATCGTGGGC GGCATTCGCC TCTCGATCTT CACCCCCACC
GAGGCGGGCG CCATCGCGAC CATCGTCACG CTCGGCATCG GGTTCTTCCT CTACCGCGAG
ATGAAGCTCG CCGACGTGGC CTCGGCCTTC GCCGAGACGG CGCGTCAGAC GTCGGCGGTC
CTGCTTGTCA TCATGACATC TTCGGCGCTG GCCTGGATCT TCTCGATGGA GCGCGCGGGG
ATCACGATGG CCGACCTGAT CACCTCGCTC ACCACGAACC CCTGGCTGTT CCTGCTGGCG
GTCAATGCGC TTCTTCTGGT CCTGGGCATG TTCATCGAGG GGACCGCGCT GATGATCATC
CTCGTGCCGC TGCTCAAGCC GGTGGTGCTG CAACTGGGGA TCGACCCTGT CCATTTCGGG
ATCGTGCTGA TCCTGAACCT GTCGATCGGC ACCCTCACGC CGCCCGTGGG CACCGTGCTG
TTGCTGGTGA CAAACCTCAC CGGCGCGAAG CTGGGAGAGT TCCTGCGCGA CGGCTGGCCC
TTCCTGCTGG CGCTGGTCCT GGCGCTGCTG GTCGTGACCT TCGTCCCGGC CCTGTCGCTG
GCGCTGATCT GA
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| Protein sequence | MTWFIVIALM FALFALNMRI YLAMFAAVVA YFVFFSTIPL PIAVQRIISP TQNTSLLAIP
FFVLLGTLLG TTGIAARLLK LADLMVGRLT GGLGHTNVML STLMGGISAS NLADAAMMCR
ILVPEMRRQG YSAGAAAAIT ACGSLITPII PPGIALIIYA LVADVSIGAM FTAGILPGLL
CALLLLTAVW LNARSKGLRP SRDSWPTARE TRQTLLGAWP ALFLIVVIVG GIRLSIFTPT
EAGAIATIVT LGIGFFLYRE MKLADVASAF AETARQTSAV LLVIMTSSAL AWIFSMERAG
ITMADLITSL TTNPWLFLLA VNALLLVLGM FIEGTALMII LVPLLKPVVL QLGIDPVHFG
IVLILNLSIG TLTPPVGTVL LLVTNLTGAK LGEFLRDGWP FLLALVLALL VVTFVPALSL
ALI
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