Gene Rsph17025_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3338 
Symbol 
ID5085829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp213621 
End bp214622 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID640484907 
Producthypothetical protein 
Protein accessionYP_001169524 
Protein GI146279366 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.815822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.18159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG ACGAGCTTTA CCGCCTGCTG CGCATTTCGC ATGTGCAGGC GCAGGGGATC 
GTGGACACGG TCCGCGATCC GCTGCTGGTG CTGGCCGGCG ATCTCACCGT CATCAGCGCC
AACCCCGCCT TCTACCGGAC CTTTGCGACC GACCGCGACA GCACCATCGG CGTGCCGCTC
TACGAGCTTG GCAATGGCCA GTGGAACATC GACGAGTTGC GCCTCCTGCT GGAGCGGGTG
ATCCCGCACA GCGCCTCGGT CTTCGACTAC GAGGTGCTGG CCAGGTTCCC GGATGTGGGC
CGCCGCACAA TGCTGATCAG CGCGCAACGC CTCATCCACC CCGACAATGG TCAGCGGGTT
CTGCTGGTGA CCATCGTGGA CGAGACGACC CGGCGCCGGA AGGAGGAAGA GAAGAAGAAC
ATCCTCATCG GCGAGCTTGA TCACCGGATC AAGAACCTCC TGTCGGTCAC GCAGGCGCTG
GCGCGGCAGA CCGGGACCGC GGGCCGCACC GCCGAGGAAT ATCGCGACGC CTTCCTCGGG
CGTTTCGAGG CGCTCGCCCG GGCGCTCGAC GTTTCCTCTC GCGCGATCGC CGCCCGGCTT
CCCGATCTCG TCCGATCGGT GATGGAGCCC TACCTGGCCG AGGGAACGCA CGTGTCGGTG
GCCGAGGCGC CCTCGGTCGA GCTGCGGCCC GCCTACGCCA TGTCGCTGGG GATGATCCTG
CACGAGCTGG CCACGAACGC GGCCAAGTAC GGCGCCCTGT CGGTGCCGGA GGGGCGCGTC
TGCATCGACT GGGAACTGGG AACGGATGAC GATGGCGGCC CCGACATCCG CCTGCGCTGG
CAGGAGCGCG GCGGTCCCCG CCCCTCGCCA CCCGAATCGG TGGGTTTCGG CACCCGGATG
ATCCGGTTTG CAGCCGAATT CGAACTGGGC GGCACTGTGG AACTTGATTA CGCCTCCGAG
GGTTTCGTGG CTCTCCTGAG CTTCCCCCGC CCGCGATCCT GA
 
Protein sequence
MDLDELYRLL RISHVQAQGI VDTVRDPLLV LAGDLTVISA NPAFYRTFAT DRDSTIGVPL 
YELGNGQWNI DELRLLLERV IPHSASVFDY EVLARFPDVG RRTMLISAQR LIHPDNGQRV
LLVTIVDETT RRRKEEEKKN ILIGELDHRI KNLLSVTQAL ARQTGTAGRT AEEYRDAFLG
RFEALARALD VSSRAIAARL PDLVRSVMEP YLAEGTHVSV AEAPSVELRP AYAMSLGMIL
HELATNAAKY GALSVPEGRV CIDWELGTDD DGGPDIRLRW QERGGPRPSP PESVGFGTRM
IRFAAEFELG GTVELDYASE GFVALLSFPR PRS