| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3311 |
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| Symbol | |
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| ID | 5085802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 183360 |
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| End bp | 185072 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640484883 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_001169500 |
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| Protein GI | 146279342 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.140965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC AGCTTGGTGT CGGCAAGTCG CCGACGGGCA TCCAGGGCTT TGATGATCTC
ACGTTGGGCG GTTTGCCGAC GGGTCGTCCA AGCCTCATCT GCGGGTCGGC CGGATGCGGC
AAGACCCTCT TCGCCTCGAC CTTCCTGATC AATGGCGTCC GCCAGCACGA CGAGCCGGGC
GTCTTCGTCA CCTTCGAGGA ACGGCCCGAG GATATCGTCA CCAACGTCGC CTCGCTGGGA
TTCGAACTCG ACAGCCTGAT GGATCAGGGG CTGATCGCGA TGGAGCACAT CACCATCGAT
CCGTCGGAGG TGGCCGAGAT CGGCGACTAT GATCTCGAGG GGCTGTTCCT GCGTCTGGAA
CTGGCGATCG ACTCCGTCGG GGCCAAGCGG GTCGTGCTCG ACACGATCGA AAGCCTGTTC
TCGGCCTTTT CCAAGCCCGC CATCCTTCGC GCCGAAATCC GTCGCCTGTT CGACTGGCTG
AAAGAGCGCG GCCTCACCAC CGTCATCACC GCCGAGCGTG GCGACGGGGC GCTGACGCGT
CAGGGGCTTG AGGAATATGT GTCGGATTGC GTGATCCTGC TCGATCATCG CGTCCACAAC
CAGATTTCCA CCCGGCGCCT GCGGATCGTG AAATACCGCG GCACGGCGCA CGGGACCAAC
GAATATCCGT TCCTCATCGA CGCGGATGGA TTCTCGGTCC TGCCGGTCAG CTCGATCGGC
CTTGCGCATC AGGTGCACGA AGAGCGCATC GCTTCGGGCG TGCCGGACCT TGACGCGATG
CTGACGGGGG GCGGGTTCTT CCGGGGTTCG TCGATCCTCG TCTCGGGGGT GGCCGGTTCG
GGCAAGTCCT CGCTGGCGGC CCATTTCGCG GCCGCGGCCT GCGCGCGGGG CGAACGGGCG
ATGTATTTCT CGTTCGAGGA GGCCGCCGAT CAGGCGGTGC GCAACATGCG CTCGCTGGGG
CTCGATCTCG GGCGCTGGCG CGAGGCGGGG TTGCTGCGCT TCATGGCGGC GCGGCCCACC
TTCTACAGCC TCGAGATGCA TCTTGCCGTG ATCCTGCGCG AGGTCATCCG GTTCGAGCCC
ACGGTGGTGG TGCTCGACCC GATCTCGGCC TTCACCGAAA GCGGCGACCG GCTCGAGGTC
CAGTCGATGC TGCTGCGGAT CGTGGACTTC CTCAAGGCCC GCGGCGTCAC CGGGATCTTC
ACCCACCTGG CCCACGGACG CGAGGAGGCG ACGACGGATG CGGGCCTCTC CTCGCTGATG
GATGGCTGGG TGCTGATGCT GAACCGCGAG GTGAATGGCG AATTCAACCG CGAGCTCTAT
CTGCTCAAGG CGCGGGGCAC TTCCCATTCC AATCAGGTTC GGGAATTTGT CATGAGTGAC
AAGGGGATAT CGCTCGTTCC GCCGCATCTG GGTGAGGGCG GGGCCCTCAC GGGGACGGCA
CGGAAGGCCG AGGAGGCGCG CCTGCGGCGC ATCGAGGCCG AGCGGCTTGC CGAGACCGGC
CGGTTGCAGC AGCAGATCGA GCAGCGCCGT CGCCGGGCGC GCGCGCAGAT CGAGGCGCTC
GAGGCGGAAC TGAGGGCCGA GGAAATCGCG TTGCAGGCGC TTCTGGCCTC CGAAGAGACC
CAGGACCGCC AGCGCGCGGA AGATGTGGCC GAGCTGGCCC GCAGCCGTGG GGCCGACCGT
TTTGTGCCGG AGTCGGCGGA GGGAGGGAAA TGA
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| Protein sequence | MSSQLGVGKS PTGIQGFDDL TLGGLPTGRP SLICGSAGCG KTLFASTFLI NGVRQHDEPG
VFVTFEERPE DIVTNVASLG FELDSLMDQG LIAMEHITID PSEVAEIGDY DLEGLFLRLE
LAIDSVGAKR VVLDTIESLF SAFSKPAILR AEIRRLFDWL KERGLTTVIT AERGDGALTR
QGLEEYVSDC VILLDHRVHN QISTRRLRIV KYRGTAHGTN EYPFLIDADG FSVLPVSSIG
LAHQVHEERI ASGVPDLDAM LTGGGFFRGS SILVSGVAGS GKSSLAAHFA AAACARGERA
MYFSFEEAAD QAVRNMRSLG LDLGRWREAG LLRFMAARPT FYSLEMHLAV ILREVIRFEP
TVVVLDPISA FTESGDRLEV QSMLLRIVDF LKARGVTGIF THLAHGREEA TTDAGLSSLM
DGWVLMLNRE VNGEFNRELY LLKARGTSHS NQVREFVMSD KGISLVPPHL GEGGALTGTA
RKAEEARLRR IEAERLAETG RLQQQIEQRR RRARAQIEAL EAELRAEEIA LQALLASEET
QDRQRAEDVA ELARSRGADR FVPESAEGGK
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