Gene Rsph17025_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3292 
Symbol 
ID5085783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp164117 
End bp165319 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID640484864 
Producthypothetical protein 
Protein accessionYP_001169481 
Protein GI146279323 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.406168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAG CCCTTCTTTC TGCGGTGTCG CTGGCTGCGC TGGCCGCGCC TGCGGCGGCG 
CAGGTGTCGG ATGACGTGGT CAAGATCGGC ATCCTGAACG ACCAGTCCGG CGTCTATGCC
GACTTCGGCG GCCGGTTCAG CTATGAGGCC GCGCGGATGG CGGTCGAGGA TTACGGCGGC
ACGGTGCTGG ACAAGCCGGT CGAGGTCGTG ACCGCGGACC ACCAGAACAA GGCCGACATC
GCCTCGAACA TCGCGCGCCA GTGGTATGAC ACCGAGCAGG TCGATGCGAT CATGGAACTG
ACCACCTCCT CGGTCGCGCT GGCCGTTCAG GCGCTGTCGC AGGAGAAGCA GAAGGTCACG
ATCACCACCG GCGCGGCCAC GACCGAGCTG ACGGGCAAGC AATGTTCGCC CTACGGTTTC
CACTGGGCCT ACGACACGCA TGCGCTGGCG ATCGGCACCG GCGGCGCGCT GGTCGAACAG
GGCGGCGACA GCTGGTATTT CCTGACCGCC GACTATGCCT TCGGCTATTC GCTGGAAGAG
AACACCGGCA ATGTCGCCAA GGAACGGGGC GGACAGGTTC TCGGCGCGGT GCGCCATCCG
CTCGCCACCA CCGACTTCTC CTCCTTCCTG CTGCAGGCGC AGGCCTCGGG CGCCAAGGTG
ATCGGCCTCG CCAATGCCGG GCTCGACACG CAGAACGCCA TCAAGCAGGC GGGCGAGTTC
GGCATCGTGC AGGGCGGGCA GCGGCTGGCC GCGCTTCTCT TCACGCTGGC CGAGGTGCAC
GGGCTCGGGA TCGAGTCGGC CCAGGGCCTG ACGCTGACCG AGAGCTTCTA CTGGAACCGC
GACGAGGAAA CGGCCGAGTT CGGCCGGCGC TTCATGGAGC GGACGGGCGC CATGCCCAAC
ATGGTCCATG CCGGGACCTA TTCGGCCGTC CTCTCCTATC TCAAGGCGAT CGAGGCGGCC
GGCACGGACG AGACCGAGGC CGTCGCGGCC AAGCTGCACG AACTGCCCGT CGAGGATGTC
TTCGCCAAGG GCGGAACGGT GGCGCCGAAC GGGCGGATGA TCTCGGACGT CTATCTGCTC
GAGGTGAAGA AGCCGGGCGA CAGCGACGTG CCGTGGGACT ATTACAACGT CCTCGCCACG
ATCCCCGGCG ATCAGGCCTA TCTCGACCCG GCCCAGAGCG GCTGCCCGCT CGTCACGAAC
TGA
 
Protein sequence
MRKALLSAVS LAALAAPAAA QVSDDVVKIG ILNDQSGVYA DFGGRFSYEA ARMAVEDYGG 
TVLDKPVEVV TADHQNKADI ASNIARQWYD TEQVDAIMEL TTSSVALAVQ ALSQEKQKVT
ITTGAATTEL TGKQCSPYGF HWAYDTHALA IGTGGALVEQ GGDSWYFLTA DYAFGYSLEE
NTGNVAKERG GQVLGAVRHP LATTDFSSFL LQAQASGAKV IGLANAGLDT QNAIKQAGEF
GIVQGGQRLA ALLFTLAEVH GLGIESAQGL TLTESFYWNR DEETAEFGRR FMERTGAMPN
MVHAGTYSAV LSYLKAIEAA GTDETEAVAA KLHELPVEDV FAKGGTVAPN GRMISDVYLL
EVKKPGDSDV PWDYYNVLAT IPGDQAYLDP AQSGCPLVTN