| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3291 |
|---|
| Symbol | |
|---|
| ID | 5085782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 163341 |
|---|
| End bp | 164114 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640484863 |
|---|
| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
|---|
| Protein accession | YP_001169480 |
|---|
| Protein GI | 146279322 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.383149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGG TCTCAGACCA CGAGCCGCGG GTGGTCCTCT CCGCCCGCGG CCTCGGCAAG
GATTTTGGCG GCTTCACGGC CGTCAACAAT GTCGATCTCG ATGTCCATCA CGCGCGGATC
CACGCGCTGA TCGGCCCGAA CGGTGCTGGA AAGACTACCG TCTTCAACCT GTTGACGAAG
TTTCTTCAAC CAAGCCGGGG CAAGATCACG CTGCTTGGCA CCGACATCAC CCGCACGCGC
CCCGACAAGG TGGCGCGCAT GGGCATGGTC CGGTCGTTCC AGATCTCGGC GGTCTTTCCG
CATCTGACCG TTCTCGAGAA CGTGCGCGTG GCGCTCCAGC GCCCGGCCGA GCTTGCGGTG
CAGTTCTGGC GCCCGCTCTC GGCACTCGAC CGGCTGAACG GCCGGGCCGA GGTGCTGCTC
GAGGAGCTGG GGCTCGAGGC CTACCGCGAC ACGCGCGCGG CCGACCTGTC CTACGGGCGC
AAGCGCGTGC TCGAGATCGC GACCACCCTC GCCCTCGATC CCGAGGTGCT GCTTCTCGAC
GAGCCGATGG CCGGCATGGG CCAGGAGGAC GTGCAGATGG TGGCCGGCAT CATCCGAGAG
GTCGCCCGGC ACCGCGCGGT GCTGATGGTG GAGCACAATC TCAGCGTCGT GGCGGACATC
TGCCATCAGG TCACGGTGCT GCAACGGGGC GAGATTCTCG CCCACGGCGA CTATGCCACC
GTCAGCGCCG ATCCGCGCGT GCGCACGGCC TACATGGGAA CGGAGGACGC ATGA
|
|---|
| Protein sequence | MAPVSDHEPR VVLSARGLGK DFGGFTAVNN VDLDVHHARI HALIGPNGAG KTTVFNLLTK
FLQPSRGKIT LLGTDITRTR PDKVARMGMV RSFQISAVFP HLTVLENVRV ALQRPAELAV
QFWRPLSALD RLNGRAEVLL EELGLEAYRD TRAADLSYGR KRVLEIATTL ALDPEVLLLD
EPMAGMGQED VQMVAGIIRE VARHRAVLMV EHNLSVVADI CHQVTVLQRG EILAHGDYAT
VSADPRVRTA YMGTEDA
|
|---|
| |