Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3290 |
Symbol | |
ID | 5085781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 162646 |
End bp | 163344 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484862 |
Product | ABC transporter related |
Protein accession | YP_001169479 |
Protein GI | 146279321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.116153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCC TGGAGGTCAC CGGCCTTCAC GCCTGGTATG GCGAGAGCCA CATCCTGCAC GGGGTCGATC TGTTCGTCGA GGAAGGCGAG ACGATCTGCA TCCTCGGCCG CAACGGCATG GGCAAGACAA CCACATTGCG CACCATCATG GGCATCCTGA GGAAGCGCAC CGGCACGATC CGGTTCGCGG GCAAGGACAT GATGGGCGTG CCGCTGCACC GCACCGCCCG CGAGGGCCTG GGCTTCGTGC CCGAGGAACG GGGCATCTTC GCCACGCTCT CGGTCGAGGA GAACCTGACG CTGCCCCCGG TGGTCGCCAG GGGCGGCCTG TCGGTGGGCG AGATCTACGA GCTTTTCCCG AACCTTAAAG AGCGACGCTC AAGCCCCGGA ACCAAGCTGT CGGGCGGCGA GCAGCAGATG CTGGCCATGG CGCGCATCCT GCGCACCGGC GCGCGCTGCC TGCTGCTGGA CGAGCCGACC GAGGGCCTGG CCCCCGTCAT CATCCAGCGC ATCGGCGAGG TGCTCGTGGA ACTGCGCGAC CGCGGCATGA CCGTGGTGCT GGTCGAGCAG AATTTCCGCT TCGCCTCAAA GGTTGCGGAC CGTTTCTACC TGATGGACCA CGGGCAGATG GTGGCGGATT TCCCGGTCGA GGATCTGCCT GCGAACATGC CGATGCTGAA CTCGGTGCTG GGGGTGTGA
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Protein sequence | MTLLEVTGLH AWYGESHILH GVDLFVEEGE TICILGRNGM GKTTTLRTIM GILRKRTGTI RFAGKDMMGV PLHRTAREGL GFVPEERGIF ATLSVEENLT LPPVVARGGL SVGEIYELFP NLKERRSSPG TKLSGGEQQM LAMARILRTG ARCLLLDEPT EGLAPVIIQR IGEVLVELRD RGMTVVLVEQ NFRFASKVAD RFYLMDHGQM VADFPVEDLP ANMPMLNSVL GV
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