| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3289 |
|---|
| Symbol | |
|---|
| ID | 5085780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 161757 |
|---|
| End bp | 162644 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640484861 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169478 |
|---|
| Protein GI | 146279320 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0960576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGA TCTTCGGCAT TCCGACGGCG GCCCTCTTCG GCCAGCTTCT CGTGGGCCTC
ATCAACGGCT CGTTCTATGC GCTTCTGTCG CTGGGGCTGG CGGTGATCTT CGGCCTTCTA
CGGGTGATCA ACTTCGCCCA TGGCGCGCAA TACATGGCCG GCGCCTTCGC CGCGCTCCTG
CTGCTGACGC AGACCGGCAT CGGATACTGG CCGGCGCTGA TCCTTGCGCC GCTGATCGTG
GGCCTTCTGG GCGCGCTGAT CGAGCGGACG ATGCTCTCGC GGCTCTACAA GCTCGATCAC
CTCTACGGGC TTCTCTTCAC CTTCGGCCTG GCCCTGACGC TGGAAGGCAC CTTCCGGTGG
TTCTTCGGCA CCTCTGGCCA GCCCTATGCC CCGCCCGCGG CGCTGACGGG GGCGGTGAAC
CTGGGCTTCA TGTTCCTGCC GATCTACCGC GGATGGGTGG TCGTGGCGTC GCTCGCCGTC
TGCATCGGCG TGTGGCTTCT GATCGAGAAG ACCAAGCTTG GCGCCTACTT GCGCGCCGCC
ACCGAGAACC CGGTCCTGGT GCAGAGCTTC GGGGTGAACG TGCCGCTTCT GTTGACCTTC
ACCTACGGGC TGGGGGCGGC GCTGGCCGCC TTTGCCGGAG TGCTCGCCGC GCCGGTCTAT
CAGGTCTCGC CGCTCATGGG CTCGAACCTC ATCATCGTCG TGTTCGCGGT TGTCGTGGTG
GGGGGCATGG GCTCGATCCT GGGCGCGATC ATCACGGGCT ACATGCTCGG CATCGCCGAG
GGGCTCACCA AGGTCTTCTA CCCCGAGGCC TCCAACATCG TGATCTTCGT GATCATGGCG
ATCGTCCTGA TCCTGCGGCC TGCGGGACTC TTCGGAAAGG ATGCGTGA
|
|---|
| Protein sequence | MMTIFGIPTA ALFGQLLVGL INGSFYALLS LGLAVIFGLL RVINFAHGAQ YMAGAFAALL
LLTQTGIGYW PALILAPLIV GLLGALIERT MLSRLYKLDH LYGLLFTFGL ALTLEGTFRW
FFGTSGQPYA PPAALTGAVN LGFMFLPIYR GWVVVASLAV CIGVWLLIEK TKLGAYLRAA
TENPVLVQSF GVNVPLLLTF TYGLGAALAA FAGVLAAPVY QVSPLMGSNL IIVVFAVVVV
GGMGSILGAI ITGYMLGIAE GLTKVFYPEA SNIVIFVIMA IVLILRPAGL FGKDA
|
|---|
| |