Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3287 |
Symbol | |
ID | 5085778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 159154 |
End bp | 160755 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484859 |
Product | hypothetical protein |
Protein accession | YP_001169476 |
Protein GI | 146279318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCCG ACTACATCAT CGTCGGCGCC GGCAGCGCGG GCTGCGTGCT GGCGAACCGC CTGTCCAGGG ATCCGCGCAA CCGGGTGCTG CTGATCGAGG CCGGCAAGCG CGACAACTAC CACTGGGTCC ACATTCCCGT GGGTTACCTC TACTGCATCA ACAATCCCCG CACGGACTGG TGCTTCACCA CCGAGCCCGA GGAAGGGCTC GAGGGCCGCA GCCTGATCTA TCCCCGCGGC AAGGTGCTTG GGGGGTGCTC CTCGATCAAC GGCATGATCT ACATGCGCGG GCAGGCCGAG GATTACGACG GCTGGCGCCA GATGGGCTGC ATCGGCTGGG GGTGGGAGGA TGTGCTGCCC CTCTTCCGCC GCCAGCAGGA CCACCACCTC GGCGAGAACG AGCACCACGG TGCGGGCGGC GAATGGCGGG TCGAGCGCGC ACGGGTCCGG TGGGCCGTGC TCGACGCCTT CCTTGATGCG GCCGAGCAGG CGGGCATTCC CCGGACCGAG GATTTCAACC GCGGCTCGAA CGAGGGCGGC GGCTATTTCG ACGTGAACCA GAGGTCCGGC ATCCGCTGGA ACACGGCCAA GGCCTTCCTG AAGCCCGCCC TCGCCCGGCC GAACCTCCGG GTCGTGACCG AGGCGCAGGT GGTGCGGCTG ATCGTCGAGG AGGGGGACGT CCGCGGGGTT CTCTACCGGC AGGCGGGTGA GCTGCGCGAG GCGCGGGCCG CGCGCGAGAC GGTGCTTTCG GCGGGCGCCA TCGGCTCGCC GCACATCCTC GAGTTGTCGG GCATCGGCGA CCCCGAGGTG CTGCGCGCCG CCGGCGTCGC GACCACGGCC GCCGTGCCGG CCGTTGGCGC GAACCTGCAG GACCATCTGC AGCTCCGCCT CGTCTTCAAG GTGCAGGGCG TGCCCACGCT GAACGAGAAG GCCACGAGCC TCTTCGGCCG CGCGGCCATC GGGGCGGAAT ATCTCCTCCG CCGTTCGGGG CCCATGTCGA TGGCGCCGAG CCAGGTCGGG ATCTTCACCC GCTCGGGCCC CGAAAAGGCC ACGCCGGACC TCGAATTTCA TGTCCAGCCG GTCTCGCTCG ACAAGTTCGG CGACAAGGTG CACCCCTTCC CCGGCATGAC CGCCAGCGTC TGCAACCTGC GCCCTGAAAG CCGCGGCAGC GTGCATCTGA AAAGCCCCGA CCCCACACGC CAGCCCGCCA TTGCGCCGCA CTACCTCTCG ACCGAGGGGG ACCGCGAGGT GGCGGTGCGT TCGATCCTGC TCGCGCGCCA CATCGCGGCG CAGCCCGCGT TCGCCCGTTT CCACCCCGAG GAATACCGCC CCGGCGCCGA GGTGCAGAGC CGCGAGGATC TGGTGGCGGC CGCGGGCCGC ATCGGGACCA CCATCTTCCA TCCCGTAGGC ACCTGCCGCA TGGGCGCCGA CGAGGCGAGC GTGGTCGATC CGCGGCTTCG GTTCCGCGCG CTCGGCCGGC TGCGCATCGG GGATGCCTCG ATCATGCCGA CCATCACGTC GGGCAACACC AACTCACCGA CGCTGATGAT TGCCGAAAAG GCGGCCGAGA TGATCCTCGA GGACGCGCGC CACCCTGCCT GA
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Protein sequence | MEADYIIVGA GSAGCVLANR LSRDPRNRVL LIEAGKRDNY HWVHIPVGYL YCINNPRTDW CFTTEPEEGL EGRSLIYPRG KVLGGCSSIN GMIYMRGQAE DYDGWRQMGC IGWGWEDVLP LFRRQQDHHL GENEHHGAGG EWRVERARVR WAVLDAFLDA AEQAGIPRTE DFNRGSNEGG GYFDVNQRSG IRWNTAKAFL KPALARPNLR VVTEAQVVRL IVEEGDVRGV LYRQAGELRE ARAARETVLS AGAIGSPHIL ELSGIGDPEV LRAAGVATTA AVPAVGANLQ DHLQLRLVFK VQGVPTLNEK ATSLFGRAAI GAEYLLRRSG PMSMAPSQVG IFTRSGPEKA TPDLEFHVQP VSLDKFGDKV HPFPGMTASV CNLRPESRGS VHLKSPDPTR QPAIAPHYLS TEGDREVAVR SILLARHIAA QPAFARFHPE EYRPGAEVQS REDLVAAAGR IGTTIFHPVG TCRMGADEAS VVDPRLRFRA LGRLRIGDAS IMPTITSGNT NSPTLMIAEK AAEMILEDAR HPA
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