| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3287 |
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| Symbol | |
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| ID | 5085778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 159154 |
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| End bp | 160755 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484859 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169476 |
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| Protein GI | 146279318 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCCG ACTACATCAT CGTCGGCGCC GGCAGCGCGG GCTGCGTGCT GGCGAACCGC
CTGTCCAGGG ATCCGCGCAA CCGGGTGCTG CTGATCGAGG CCGGCAAGCG CGACAACTAC
CACTGGGTCC ACATTCCCGT GGGTTACCTC TACTGCATCA ACAATCCCCG CACGGACTGG
TGCTTCACCA CCGAGCCCGA GGAAGGGCTC GAGGGCCGCA GCCTGATCTA TCCCCGCGGC
AAGGTGCTTG GGGGGTGCTC CTCGATCAAC GGCATGATCT ACATGCGCGG GCAGGCCGAG
GATTACGACG GCTGGCGCCA GATGGGCTGC ATCGGCTGGG GGTGGGAGGA TGTGCTGCCC
CTCTTCCGCC GCCAGCAGGA CCACCACCTC GGCGAGAACG AGCACCACGG TGCGGGCGGC
GAATGGCGGG TCGAGCGCGC ACGGGTCCGG TGGGCCGTGC TCGACGCCTT CCTTGATGCG
GCCGAGCAGG CGGGCATTCC CCGGACCGAG GATTTCAACC GCGGCTCGAA CGAGGGCGGC
GGCTATTTCG ACGTGAACCA GAGGTCCGGC ATCCGCTGGA ACACGGCCAA GGCCTTCCTG
AAGCCCGCCC TCGCCCGGCC GAACCTCCGG GTCGTGACCG AGGCGCAGGT GGTGCGGCTG
ATCGTCGAGG AGGGGGACGT CCGCGGGGTT CTCTACCGGC AGGCGGGTGA GCTGCGCGAG
GCGCGGGCCG CGCGCGAGAC GGTGCTTTCG GCGGGCGCCA TCGGCTCGCC GCACATCCTC
GAGTTGTCGG GCATCGGCGA CCCCGAGGTG CTGCGCGCCG CCGGCGTCGC GACCACGGCC
GCCGTGCCGG CCGTTGGCGC GAACCTGCAG GACCATCTGC AGCTCCGCCT CGTCTTCAAG
GTGCAGGGCG TGCCCACGCT GAACGAGAAG GCCACGAGCC TCTTCGGCCG CGCGGCCATC
GGGGCGGAAT ATCTCCTCCG CCGTTCGGGG CCCATGTCGA TGGCGCCGAG CCAGGTCGGG
ATCTTCACCC GCTCGGGCCC CGAAAAGGCC ACGCCGGACC TCGAATTTCA TGTCCAGCCG
GTCTCGCTCG ACAAGTTCGG CGACAAGGTG CACCCCTTCC CCGGCATGAC CGCCAGCGTC
TGCAACCTGC GCCCTGAAAG CCGCGGCAGC GTGCATCTGA AAAGCCCCGA CCCCACACGC
CAGCCCGCCA TTGCGCCGCA CTACCTCTCG ACCGAGGGGG ACCGCGAGGT GGCGGTGCGT
TCGATCCTGC TCGCGCGCCA CATCGCGGCG CAGCCCGCGT TCGCCCGTTT CCACCCCGAG
GAATACCGCC CCGGCGCCGA GGTGCAGAGC CGCGAGGATC TGGTGGCGGC CGCGGGCCGC
ATCGGGACCA CCATCTTCCA TCCCGTAGGC ACCTGCCGCA TGGGCGCCGA CGAGGCGAGC
GTGGTCGATC CGCGGCTTCG GTTCCGCGCG CTCGGCCGGC TGCGCATCGG GGATGCCTCG
ATCATGCCGA CCATCACGTC GGGCAACACC AACTCACCGA CGCTGATGAT TGCCGAAAAG
GCGGCCGAGA TGATCCTCGA GGACGCGCGC CACCCTGCCT GA
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| Protein sequence | MEADYIIVGA GSAGCVLANR LSRDPRNRVL LIEAGKRDNY HWVHIPVGYL YCINNPRTDW
CFTTEPEEGL EGRSLIYPRG KVLGGCSSIN GMIYMRGQAE DYDGWRQMGC IGWGWEDVLP
LFRRQQDHHL GENEHHGAGG EWRVERARVR WAVLDAFLDA AEQAGIPRTE DFNRGSNEGG
GYFDVNQRSG IRWNTAKAFL KPALARPNLR VVTEAQVVRL IVEEGDVRGV LYRQAGELRE
ARAARETVLS AGAIGSPHIL ELSGIGDPEV LRAAGVATTA AVPAVGANLQ DHLQLRLVFK
VQGVPTLNEK ATSLFGRAAI GAEYLLRRSG PMSMAPSQVG IFTRSGPEKA TPDLEFHVQP
VSLDKFGDKV HPFPGMTASV CNLRPESRGS VHLKSPDPTR QPAIAPHYLS TEGDREVAVR
SILLARHIAA QPAFARFHPE EYRPGAEVQS REDLVAAAGR IGTTIFHPVG TCRMGADEAS
VVDPRLRFRA LGRLRIGDAS IMPTITSGNT NSPTLMIAEK AAEMILEDAR HPA
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