Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3283 |
Symbol | |
ID | 5085774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 154146 |
End bp | 154994 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640484855 |
Product | hypothetical protein |
Protein accession | YP_001169472 |
Protein GI | 146279314 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.10772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCA CCTCGCGCCA GAGCCGGATC ATGGCGCATT TCCTGCTGGT GATCGGGGTG ATCGTGGTGG CCTTCCCGAT CTGGTATGTC TTCGTGGCCT CGACCCACCC TCTCCAGCAG ATCCTGCGCC CGCCGCTGCC GCTGCTGCCC GGCGCCGAGG GACCCTCGAA CTACGCCCGG GCGCTGACGG GCGACATCGG GCGCATCGGT GGCGTGGGGG TGGACAGGCT CCTCTTCAAC ACGGCCTTCG TGGCCTTTGG CATCGCCATC GGCAAGATCG TGATCTCGAT GGCCTCGGCC TATGCCATCG TCTTCTTCCG CTTTCCGCTG CGGATGGTCT GCTTCTGGAT GATCTTCATC ACCCTGATGC TGCCGGTCGA GGTGCGCATC CTGCCCACCT ACAAGGTGAT GGTGGACCTG CGCCTGATCG ACACCTACGC GGGGCTCATC CTGCCTCTGG TGGCCTCGGC CACGGGAACG CTTCTCTTCC GGCAGTTCTT CATGACGATC CCGAACGAGC TGATGGAGGC CGCGCGCGTC GATGGCGCAG GCCCATGGCG CTTCTTCAAG GATATCCTGC TGCCGCTCTC GGCCACCAAC ATCGCGGCGC TGTTCGTGAT CCTCTTCATC TACGGATGGA CGCAGTATCT CTGGCCGCTC CTTGTGACCA ACTCGAACTC GATGAACACC ATCGTGATCG CCCTGAGAAA GATGATCTCC TTCGCCGATG CCGACACGCC CTGGGACCTC GTGATGGTCA CCTGCGTGCT GGCCATCCTG CCGCCGATCC TGATCGTGGT CCTGATGCAG CGGTGGTTCG TGAAGGGACT TGTGGAGACG GAGAAGTAA
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Protein sequence | MIGTSRQSRI MAHFLLVIGV IVVAFPIWYV FVASTHPLQQ ILRPPLPLLP GAEGPSNYAR ALTGDIGRIG GVGVDRLLFN TAFVAFGIAI GKIVISMASA YAIVFFRFPL RMVCFWMIFI TLMLPVEVRI LPTYKVMVDL RLIDTYAGLI LPLVASATGT LLFRQFFMTI PNELMEAARV DGAGPWRFFK DILLPLSATN IAALFVILFI YGWTQYLWPL LVTNSNSMNT IVIALRKMIS FADADTPWDL VMVTCVLAIL PPILIVVLMQ RWFVKGLVET EK
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