| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3280 |
|---|
| Symbol | |
|---|
| ID | 5085771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 151248 |
|---|
| End bp | 152654 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640484852 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001169469 |
|---|
| Protein GI | 146279311 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.880154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAT CACATGGCCT TATGATGAAC AGCCTTTCGA ACTCGCTTGC TGCCGCCGAC
ATCGCCCATT CGCTGCATCC CTACACGAAT GCCCGCGCGC ACGAGCGCAA CGGCCCGGTG
ATCATCACCC GAGGCGACGG CGTGCATGTC TATGACAGCG AGGGCCGCGA ATATATCGAA
GGGCTCGCCG GACTCTGGTC GGTGGCCGTG GGCTTCTCCG AGAAACGTCT GGCCGAGGCC
GCGGCCCGGC AGATGGCCGA ACTGCCCTAC TACCACACCT TTGCGGGCAA GGCGCACGAG
CCGCAGATCC GGCTGGCCGA GAAACTGGTC GAGATGACGC CCGAGGCGCT GACGCGGGTC
TTCTTCACCA ACTCGGGCTC CGAGGCCAAC GACACGGTGG TCAAGCTCGT CTGGTTCATG
AACAACGCCC TCGGCCGGCC CGAGAAGAAG AAGTTCCTCT CGCGCATCAA GGGCTACCAC
GGCATCACCA TCGCCTCGGG CTCGCTGACG GGGCTGCCCG TCAACCACAA GGGCTTTGAC
CTGCCGGCGA TCCCGGTCGT CCACCTGACC TGCCCGCACC ACTGGCGCTT CGGCGCCGAG
GGCGAGAGCG AGGCCGACTT CTGCGCGCGC CTCTTGCGCG AGGCCGAGGA GACGATCCTC
GCCGAAGGCC CCGAGACCAT CGCGGCCTTC ATTGGCGAGC CGGTGATGGG CGCGGGCGGC
GTGATCGTGC CGCCCGAGGG CTACTGGGCC GGCATCGAGG CGCTCTGCCG GAAATACGAC
ATCCTGCTCG TCTCGGACGA GGTCATCAAC GGCTTTGGCC GCACGGGCGC GCGCTGGGGC
TGCGAGAAGT TCGGCTTCAC CCCCGACATC CTCGTGACGT CGAAGCAGCT GACCTCATCC
TACATGCCCC TGGCGGCGGT GCTGATGACC GATGCGGTCT ATCAGGCGAT TGCCGATCAG
ACCGAGAAAC TCGGGACGCT GGGGCACGGG TTCACCGGCA CGGGCCATCC CGTCGCGACG
GCGGTGGGGC TCGAAAACCT GAAGATCATC GAGGAGCGCG ATCTGATGGG CAATGCCGCG
CGCCTTGAGG CGCCGTTCCA GGAGGGGCTG AGGGCTCTTG GCGGCAATCC TCTGGTGGGC
GAGGTCCGGG GCATCGGCCT GATCGCGGCC ATCGAGATGG TGGCCGACCG CGCGACGAAG
CGGGGCTTCG AGCCTGCGGG CAAGGTGGGC GCGGGCGCCG CGGCCTTTGC GGCCGAGGAG
GGGCTCATCT GCCGCGCGCT CGGCGACACG CTCGCGCTCT GCCCGCCGCT GATCGTGACC
GAAGCCGATG TGGCGCGCAT CCTCGAACGG ATGGGCCGCG CACTGGAACG GACCGCGGAC
TGGGCCCGGG CCGAAGGGCT TGTCTGA
|
|---|
| Protein sequence | MQPSHGLMMN SLSNSLAAAD IAHSLHPYTN ARAHERNGPV IITRGDGVHV YDSEGREYIE
GLAGLWSVAV GFSEKRLAEA AARQMAELPY YHTFAGKAHE PQIRLAEKLV EMTPEALTRV
FFTNSGSEAN DTVVKLVWFM NNALGRPEKK KFLSRIKGYH GITIASGSLT GLPVNHKGFD
LPAIPVVHLT CPHHWRFGAE GESEADFCAR LLREAEETIL AEGPETIAAF IGEPVMGAGG
VIVPPEGYWA GIEALCRKYD ILLVSDEVIN GFGRTGARWG CEKFGFTPDI LVTSKQLTSS
YMPLAAVLMT DAVYQAIADQ TEKLGTLGHG FTGTGHPVAT AVGLENLKII EERDLMGNAA
RLEAPFQEGL RALGGNPLVG EVRGIGLIAA IEMVADRATK RGFEPAGKVG AGAAAFAAEE
GLICRALGDT LALCPPLIVT EADVARILER MGRALERTAD WARAEGLV
|
|---|
| |