Gene Rsph17025_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3277 
Symbol 
ID5085768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp148386 
End bp149273 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID640484849 
Producthypothetical protein 
Protein accessionYP_001169466 
Protein GI146279308 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CAACCGCGGC TGAACGCCCC GTCCGCGCGA AAGGCGCGCT GCGCCGGCTG 
GCCGAGCGGC CGCTTGCGCT GTTCGGGCTG CTCCTGATCC TGCTCGTGGT GGGCGGCGCG
GTCTTCGCGC CCCTGATCGC CCCCTTCGAC CCGAGCGCGC AGCATTTCGA CGGGCTGACC
ATCGAGGGCG CGCCGCTGCC GCCCGGAGGC GCGTTCCTGC TCGGCACCGA CCTTCTGGGG
CGCGACCTCT TCTCGCGCAT CCTCTGGGGC GCGCGGACCT CGCTCATCAT CGGGGTGGCG
GCGAACGGGC TTGCCCTCGT GATCGGGACG CTCGTGGGCC TGACGGCGGG CTATTTCCGC
GGCTGGATCG GGGCGGTGCT CATGCGCTTC ACCGACCTGA TGATGGCCTT CCCGGCGCTG
CTGCTGGCCA TCTGCCTCGC CGCGATCTTC CAGCCCTCGC TCTGGATCGT GGCCATGGTG
ATCGCCTTCG TGAACTGGGT GCAGACGGCG CGGGTGATCT ACACCGAGAC CTCGGCGCTG
TCCGAGCGCG AGTTCATCGC GGCCGAACGG ACCCTCGGCG CGGGCACGGG GCGGATCCTC
TTCCGCCACA TCCTGCCGCA TCTTCTGCCC ACGATCATCG TCTGGGGCAC GCTCGGCATC
TCGACCACGG TGCTGCTCGA GGCGACGCTC TCCTACCTCG GCGTGGGGGT GCAGCCGCCG
ACGCCCAGCT GGGGCAACAT CATCTTCGAG AACCAGACCT ACTTCCAGTC GGCGCCCTGG
CTCGTCTTCA TTCCGGGCGC GGCGATCCTG CTGCTCGCGC TCGCCTTCAA CCTCGTCGGA
GACGCGCTGC GCGACGTGCT CGACCCGACC CAGCGCGGGA GGGACTGA
 
Protein sequence
MTDATAAERP VRAKGALRRL AERPLALFGL LLILLVVGGA VFAPLIAPFD PSAQHFDGLT 
IEGAPLPPGG AFLLGTDLLG RDLFSRILWG ARTSLIIGVA ANGLALVIGT LVGLTAGYFR
GWIGAVLMRF TDLMMAFPAL LLAICLAAIF QPSLWIVAMV IAFVNWVQTA RVIYTETSAL
SEREFIAAER TLGAGTGRIL FRHILPHLLP TIIVWGTLGI STTVLLEATL SYLGVGVQPP
TPSWGNIIFE NQTYFQSAPW LVFIPGAAIL LLALAFNLVG DALRDVLDPT QRGRD