Gene Rsph17025_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3272 
Symbol 
ID5086021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp142295 
End bp142987 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID640484844 
Producthypothetical protein 
Protein accessionYP_001169461 
Protein GI146279303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC GCCTGCAGGG GATCTTCGCG GGATACGGCG GCTCGCAGGT TCTGGCGGGG 
ATCGATCTGG GTCTCGGCGC AGGTGAGGCG GTGGCGCTGC TCGGCCGGAA CGGGATGGGC
AAGACCACGA CCGTCCGCAC GATCTTCGGC CTTCTGCGCC CCACCTCGGG CCGGATCGAG
GTGGCGGGGC GCGACCTGAC CGGGGCCCCT CCCTTCGTGA TCGCGCGCGC GGGGCTCGGG
CTCGTGCCCG AGGGTCGGCA GATCTTCCCC ACTCTCAGCG TCGAGGAAAA TCTGGTGGCA
ACTGCCCGTG GCCCCGGCTC CTGGGATCTC GCGAAGGTCT ACGCCCTGTT CCCGCGGCTC
GCCGAGCGCA AGCGGCACGG AGGCAGCCAG CTCTCGGGCG GCGAGCAGCA GATGCTGGCC
ATCGGCCGCG CGCTGATGAC GAACCCGCGG CTTCTGGTCC TCGACGAGGC GACCGAGGGG
CTCGCGCCGC TGATCCGGGC CGAGATCTGG GACTGTCTGG GCCGGCTGCG CGCGGAAGGG
TTGGCGATCC TCGTGATCGA CAAGAACATC GGCGCGCTGT CGCGCCTCGT GGACCGGCAT
GTGGTGATCG AGCGCGGCCG GCTGGTCTGG CAGGGCTCCA GCGCGGATCT CGCCGCCGAG
CCTCGGGTTC GCGAGAGGTT CCTGCACGTC TAG
 
Protein sequence
MFLRLQGIFA GYGGSQVLAG IDLGLGAGEA VALLGRNGMG KTTTVRTIFG LLRPTSGRIE 
VAGRDLTGAP PFVIARAGLG LVPEGRQIFP TLSVEENLVA TARGPGSWDL AKVYALFPRL
AERKRHGGSQ LSGGEQQMLA IGRALMTNPR LLVLDEATEG LAPLIRAEIW DCLGRLRAEG
LAILVIDKNI GALSRLVDRH VVIERGRLVW QGSSADLAAE PRVRERFLHV