| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3266 |
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| Symbol | |
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| ID | 5086015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 134423 |
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| End bp | 136570 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484838 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169455 |
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| Protein GI | 146279297 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.491727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGA TGTCCGATGC CGGTCCCGTC GTCGTCGCGG AAGGTGTCGA TGACGAACCC
TTGTCCGCGA ACCAGCGCGC CTTCGGCAGC CGCCTCAACC ATGGCGTGAC GCTGCTCTGC
GCGCTCTACA CCGCCTTCCA CATCGTGGTG ATGAACTTCT ATCCGCTGGA GACCTGGACC
TACCGGATGC TCCATATCGC GGGGGGGCTG GTCATCGGCT TCGTGATCTA CGCGGCGCTC
CTGCTGCAGT CCGAGGATGA CCGGCCGCGG CGGAGCCTTG CGGAATGGGC GGTGATCGGG
CTTGCGGCGG CCGGCGTGGT CTATGGCGCG GCGATGGTGG CCTATGCCTG GGCGGCCTGG
TGGGTGGCGG GCGTGGCGCG TCCCCCGGCC TTCGTCTTCC AGACCTACGG CTGGCCGCTG
ATCCTGGGCA CCCTCGCCGC CATCGCGGCG GGCTGGGTCT GGGGCGGGCG CGACCGCAGC
CGGGTCCATC CGGCCGACTG GCTGCTGGCG CTGTCGGCGC TGGCGATGAC CGGCTACATC
CTCTTCAACG TGGGGCCGAT CCGGCTCCGG GCCGGCACCG CGATGGCCCA GCCCGCCGAT
TTCCACGCAG CCCTCGTGGG GGTGCTGCTG ATCCTGGAAC TCACCCGCCG GGTGGCGGGA
CTGGCGCTGG TGATCATCGC CTCGGTCTTC ATCGCCTATT CGTTCCTCGG GCCCTACCTG
CCCGGCTTCC TCACCCATCG CGGCTATGAC CCGCAGCGCT TCTTCACCTA CATCTTCACC
GATCAGGGGA TTCTCGGCGC ACCGATTGCG GTCTCATCGA CCTACATCAT CCTGTTCATC
GCCTTTGCGG CCTTCCTGCA GGCCAGCCGC GTCGGCGAGT ATTTCGTCAA CTTCGCCTTC
GCCGCAGCCG GCCATCTGAG GGGCGGCCCG GCCAAGGTCG CGATCTTCGG GTCGGGCCTG
ATGGGGATGA TCAACGGCAC CTCGGCGGGC AATGTGGTGG CGACCGGATC GCTCACCATC
CCGCTGATGA AGAAGGTGGG CTATCCGGCG AAAAGCGCCG CCGGCATCGA GGCGACGGCC
TCGTCGGGCG GCCAGATCCT GCCGCCGATC ATGGGCGCGG GCGCCTTCAT CATGGCCGAG
GTCACCGGCA TACCCTACAC CGAGATCGTG GTGGCGGCGA TCATCCCGGC AGTGCTCTAC
TTCGTCTCGG TCTATTTCAT GGTCGATTTC CAGGCCCGGA AGCTCGACAT GAAGGGCCTG
CCCAAGGACC AGCTGCCGAA GTTCGCGGTT CTGGCACGGC AGATCTACCT CTTCCTGCCG
ATCGTGATCC TGATCTACAC GCTCTTCGCC GGCTATACGG TGATCCGCGC GGGCACGGTG
GCGATGGCCT CGGCGGCGGT GGTCTCCTGG CTCACGCCCT ACCGGATGGG GCCGGGCGCG
ATCTACCGCG CGCTCGACTT GGCCGCCCGG ATGTCGATCC AGCTGGTCGC CGTCTGTGCC
GCCGCGGGGA TCATCGTGGG GGTGATCGCG CTGACCGGCG TGGGCGCGCG CTTTTCCTCG
CTTCTGCTGG GGCTCGCCGA CCAGAGCCAG GTGATCGCGC TGTTCTTCGC CATGATCATC
TCGATCGTGC TGGGGATGGG GATGCCGACG ACGGCCGCCT ATGCGGTGGC GGCGGCGGTG
GTGGCTCCGG GCCTGATCCA GCTGGGCATC CCGCCGCTGG TCGCGCATTT CTTCGTCTTC
TACTACGCGG TCATGTCGGC CATCACGCCC CCTGTCGCGC TGGCCGCCTA TGCCGGGGCG
GCCATCTCCG GATCCGAGCC GATGCGGACC TCGGTCGAGG CCTTCAAGCT GGGCCTTGCC
GCCTTCATCG TGCCCTTCAT GTTCTTCAAC TCGCACGAGT TGCTGATGCA GGGCGAGTGG
GCGGCGATCC TGCATGTGTT CCTCAGCGCC TGCCTTGGGG TGCTGCTGCT GTCGGCGGCG
GTGCAGGGCT GGCTCTTCGG GCGGCTGAAC GGGGTCCTGC GGCTGCTGCT GCTGGGCGCC
GCGCTGGCGA TGATCGACGG CGGCTGGCTG ACCGATGCGA TCGGGATCGC TGCGGCCGGG
CTGGTGGCGC TCCTGCAGCG CCGCGCACCG TCCACCGCCA GCCTCTGA
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| Protein sequence | MSRMSDAGPV VVAEGVDDEP LSANQRAFGS RLNHGVTLLC ALYTAFHIVV MNFYPLETWT
YRMLHIAGGL VIGFVIYAAL LLQSEDDRPR RSLAEWAVIG LAAAGVVYGA AMVAYAWAAW
WVAGVARPPA FVFQTYGWPL ILGTLAAIAA GWVWGGRDRS RVHPADWLLA LSALAMTGYI
LFNVGPIRLR AGTAMAQPAD FHAALVGVLL ILELTRRVAG LALVIIASVF IAYSFLGPYL
PGFLTHRGYD PQRFFTYIFT DQGILGAPIA VSSTYIILFI AFAAFLQASR VGEYFVNFAF
AAAGHLRGGP AKVAIFGSGL MGMINGTSAG NVVATGSLTI PLMKKVGYPA KSAAGIEATA
SSGGQILPPI MGAGAFIMAE VTGIPYTEIV VAAIIPAVLY FVSVYFMVDF QARKLDMKGL
PKDQLPKFAV LARQIYLFLP IVILIYTLFA GYTVIRAGTV AMASAAVVSW LTPYRMGPGA
IYRALDLAAR MSIQLVAVCA AAGIIVGVIA LTGVGARFSS LLLGLADQSQ VIALFFAMII
SIVLGMGMPT TAAYAVAAAV VAPGLIQLGI PPLVAHFFVF YYAVMSAITP PVALAAYAGA
AISGSEPMRT SVEAFKLGLA AFIVPFMFFN SHELLMQGEW AAILHVFLSA CLGVLLLSAA
VQGWLFGRLN GVLRLLLLGA ALAMIDGGWL TDAIGIAAAG LVALLQRRAP STASL
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