| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3260 |
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| Symbol | |
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| ID | 5086009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 128562 |
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| End bp | 129842 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484832 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169449 |
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| Protein GI | 146279291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.380714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.697136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG TTGCCATCGC CTTCGTGATC CTTCTGGTGC TGGGGATGCC GGTGGCCTTC
GCCATCGGGA TCTCGGGGCT TCTGTTCTTC TTCCAGCACC CCGAGCTGCC CCGGACCATC
CCGCTGCAGC TGACCATCTC TCAGACGCAG AACTTCGCGC TGCTCGCGGT GCCGATGTTC
ATCATCGCGG GCAATCTGAT GAACCGCTCG GGCATCACCG AACGGCTGCT CGAGCTGGCC
TCGATCCTGA CAGGGCGGCT GCGGGGCGGG CTTGCGCAGG TCTCGATCGC GCTGTCGGCG
CTGATGGGAG GGGTCTCGGG CTCGGCCATC GCGGATGCGG CGATGCAGTC GCGGGTGCTG
GGCGGCGAGA TGATCCGCCG CGGCCTCTCG CCGGGCTTTG CCGCGGGGGT GCTCTGCTAT
GGCTCGCTGC TGACGCCGAT CATCCCGCCG GGCATCGGCA TGATCCTTTA CGGCACCATC
GGGCAGGTCT CGATCGGACA GATGTTCGCG GCGGGGATCA TCCCGGCGCT GATGCTGGGG
GCGGGGCTGT CGATCGCCGT CTCGCTGACC GCGCGCCGGC GCGGCTACCC GCCCGAGCGC
GACCGCCGCC CGACGCTGGC CGAGGCGGGG CTGGCCTTCC GCGGCGGCTT CTGGGCGCTG
CTCTTTCCGG TCATCCTGCT GGTGGGCTTG CGCAGCGGCG TCTTCACCCC GTCCGAGATC
GGCGCCGCAG CCGTGGTCTA TGCCCTGTTC GTCGGGGCGG TCATCTACCG CCGCCTGACC
GGCCGGGGCT TTGTGGAGGC GCTGGAGGTC AGCCTTGGCG ACATCGGCGC GGTGATCTTC
CTCGTCGCGG TCTCGGCGAT CTTCGGTTAC GGCATCGTGC TCGAGCGGAT CCCGACCCTT
GTCTCGGGCG CCATGCTGGG GCTGACCGAC AATCTCCAGG CGGTGATGGT GCTGATCGCG
ACCTTCACGA TCCTCGCGGG CTTTGTGGTC GATGCCACGG TGCTGATCAT CATGCTGACG
CCGATCTTCC TGCCGCTGAT CCGCAGTCTG GGCGGCGACC CGGTGCATTT CGGGATCGTC
TTCATCATCG CGGCGACGAT CGGCAACTTC ACCCCGCCGA TCGGAGCGGC CATGTACACG
GTCTGCTCGA TCCTGAAGGT GAAGGTCGGC GCCTACACGC GCGAGTCCCT GCCGCTGCTG
CTGTCGGTCT TCCTTGTCAC GCTGCTCCTC GTCTTCCTGC CGGGGGTGGT GCTGTTCCTG
CCGACGCTGA TGTTCCGATG A
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| Protein sequence | MLIVAIAFVI LLVLGMPVAF AIGISGLLFF FQHPELPRTI PLQLTISQTQ NFALLAVPMF
IIAGNLMNRS GITERLLELA SILTGRLRGG LAQVSIALSA LMGGVSGSAI ADAAMQSRVL
GGEMIRRGLS PGFAAGVLCY GSLLTPIIPP GIGMILYGTI GQVSIGQMFA AGIIPALMLG
AGLSIAVSLT ARRRGYPPER DRRPTLAEAG LAFRGGFWAL LFPVILLVGL RSGVFTPSEI
GAAAVVYALF VGAVIYRRLT GRGFVEALEV SLGDIGAVIF LVAVSAIFGY GIVLERIPTL
VSGAMLGLTD NLQAVMVLIA TFTILAGFVV DATVLIIMLT PIFLPLIRSL GGDPVHFGIV
FIIAATIGNF TPPIGAAMYT VCSILKVKVG AYTRESLPLL LSVFLVTLLL VFLPGVVLFL
PTLMFR
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