Gene Rsph17025_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3259 
Symbol 
ID5086008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp128066 
End bp128554 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID640484831 
Producthypothetical protein 
Protein accessionYP_001169448 
Protein GI146279290 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.226697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.438812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CTTACGGCTA TTTCACGCGG GCGGAGGCGG TGATCGCGGG CCTTCTGCTT 
CTGACCATGG TCGCGCTGAT CTTTGCGGCC GGGGTGGCGC GGATGCTGCA TCATCCGCTG
AACTGGAGCA TCGACCTCGC CACCTGCTGC TTCGCCTGGG CGGCCTTCAT CTGCGCCGAC
ATCGCCTGGC GGCGCAACCT GCTGATGTCG ATCGACCTTC TGGCCGATAA CGGCCCGGCC
TGGCTGGGCC GGGCGCTGTT CTACCTCAAC CACCTGCTGA TCGTGGCCTT CCTGCTCTAT
CTGGTCGGGT ATGGCCTCTC GCTGACCTGG ACGACGCGGG CGCGCAGCTT CAACGGCATT
CCGGGCGTCA GCTATTCCTG GGTGACGGCC AGCCTGCCCG TCGGCGCGAT GCTGATGCTG
CTGACCACCG GGCTCAAGCT GCGGGCGCGG CTGGCCGAGG ACGGCTTCCT CACCCCGGCG
AAGGGATGA
 
Protein sequence
MTTAYGYFTR AEAVIAGLLL LTMVALIFAA GVARMLHHPL NWSIDLATCC FAWAAFICAD 
IAWRRNLLMS IDLLADNGPA WLGRALFYLN HLLIVAFLLY LVGYGLSLTW TTRARSFNGI
PGVSYSWVTA SLPVGAMLML LTTGLKLRAR LAEDGFLTPA KG