Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3259 |
Symbol | |
ID | 5086008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 128066 |
End bp | 128554 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640484831 |
Product | hypothetical protein |
Protein accession | YP_001169448 |
Protein GI | 146279290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.226697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.438812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGG CTTACGGCTA TTTCACGCGG GCGGAGGCGG TGATCGCGGG CCTTCTGCTT CTGACCATGG TCGCGCTGAT CTTTGCGGCC GGGGTGGCGC GGATGCTGCA TCATCCGCTG AACTGGAGCA TCGACCTCGC CACCTGCTGC TTCGCCTGGG CGGCCTTCAT CTGCGCCGAC ATCGCCTGGC GGCGCAACCT GCTGATGTCG ATCGACCTTC TGGCCGATAA CGGCCCGGCC TGGCTGGGCC GGGCGCTGTT CTACCTCAAC CACCTGCTGA TCGTGGCCTT CCTGCTCTAT CTGGTCGGGT ATGGCCTCTC GCTGACCTGG ACGACGCGGG CGCGCAGCTT CAACGGCATT CCGGGCGTCA GCTATTCCTG GGTGACGGCC AGCCTGCCCG TCGGCGCGAT GCTGATGCTG CTGACCACCG GGCTCAAGCT GCGGGCGCGG CTGGCCGAGG ACGGCTTCCT CACCCCGGCG AAGGGATGA
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Protein sequence | MTTAYGYFTR AEAVIAGLLL LTMVALIFAA GVARMLHHPL NWSIDLATCC FAWAAFICAD IAWRRNLLMS IDLLADNGPA WLGRALFYLN HLLIVAFLLY LVGYGLSLTW TTRARSFNGI PGVSYSWVTA SLPVGAMLML LTTGLKLRAR LAEDGFLTPA KG
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