Gene Rsph17025_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3257 
Symbol 
ID5086006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp125793 
End bp126842 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content74% 
IMG OID640484829 
Producthypothetical protein 
Protein accessionYP_001169446 
Protein GI146279288 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.244853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCC TTGTCGCGCT GGACCGGCTC GAGGCCTTCT GCCAGGGGGC GCTGGCCGCG 
GCGGGGGCGG ACGAGCCCAC CGCCACCGCC GCCAGCCGCG CGATGCTGCA TGGCAGCCGC
CTGGGGGTGG ACAGCCATGG GGTGCGGCTC CTTGACCATT ATGTGCGGGT GATCGAGGGC
GGTCGGGTCA ACGGTCGGCC GACCCTGCGC TTTCGCGAGG GGTTCGGGGC ACTGGCGGTG
CTGGAGGCCG ACCATGCCCA CGGTGCGCTG GCCGCTTACC GGGCGATGGA TCAAGCGACC
GACCTGGCCT CGCGGCACGG GATCGGGGCG GTGGCGATCC GCGACAGCTC GCACTTCGGG
CCGGCGGGTG CCTATGCGCT GGCCGCCGCG CATCGCGGGC AGATCGGGCT CGCGGTCTGC
AACTCGGACG CCTTCGTGCG CCTGCATGAC GGTGCCAGCC GCTTTCACGG CACCAACCCG
ATCGCCGCGG CCGCCCCCTC GGGCGGCGAG GATCCCTGGC TGTTCGACAT GGCCACTTCG
GCGGTGCCCT ACAACCGCGT GCAGCTGAAC CGCAGCCTGG GCCGTCCGAT GCCCGAGGGC
GTTGCCTCGG ACGCGGCGGG GATCGACACG ACCGAGGCCG CCGCGGTGGA GATGCTCGCG
CCGCTGGGGC ATGCCTTTGC CTTCAAGGGG GCGGGGCTCG CGGGGCTGGT CGAGATCCTG
AGCGCCGTCC TCACCGGGAT GCGGGCGAGT TTCGACATCC TGCCGATGGC CGGCCCGGAT
CTTTCGACGC CGCGGCGGAT GGGAGCCTTC GTGCTGGCGA TTCGGCCCGA CGCCGTGATC
CCGCGCGACG AGTTCGAGGC CGGGATGCGC CACTATCTGG CCGCGCTGCG CGCCTCGCCC
ACCCGCGAGG GCGCGCGCGT CCTGGCGCCG GGGGATCGCG AATGGGCCGA GGCGCGCCGC
CGGGCCACCG AGGGCGTGCC GCTCGACCCG GCGACCGAGG CGGCCTTCGC CGCGCTGGCG
CGGCGCTTCG GACTGGCCAC GCCCTTCTGA
 
Protein sequence
MTALVALDRL EAFCQGALAA AGADEPTATA ASRAMLHGSR LGVDSHGVRL LDHYVRVIEG 
GRVNGRPTLR FREGFGALAV LEADHAHGAL AAYRAMDQAT DLASRHGIGA VAIRDSSHFG
PAGAYALAAA HRGQIGLAVC NSDAFVRLHD GASRFHGTNP IAAAAPSGGE DPWLFDMATS
AVPYNRVQLN RSLGRPMPEG VASDAAGIDT TEAAAVEMLA PLGHAFAFKG AGLAGLVEIL
SAVLTGMRAS FDILPMAGPD LSTPRRMGAF VLAIRPDAVI PRDEFEAGMR HYLAALRASP
TREGARVLAP GDREWAEARR RATEGVPLDP ATEAAFAALA RRFGLATPF