| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3254 |
|---|
| Symbol | |
|---|
| ID | 5086003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 122896 |
|---|
| End bp | 123891 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484826 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169443 |
|---|
| Protein GI | 146279285 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0305467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.169706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC CGGCCGAGGC ACCGGGCAAA GCGGGCCTTG CCGTTCAGGC GCGCGGGCTC
GTCTGCCGGT TCGGCACGAT GACCGCGGTG GCGGGGATCG ACCTCGACGT TCCCCGCGGC
ACGATCTTCG CCATCCTGGG GCCGAACGGG GCGGGCAAGA CCTCGCTGCT GCGGATGCTG
TCCACCCTGC ATGTCCCCGA CGCGGGCCGG GCAACGATCA TGGGGCACGA TCTTGGGCGC
GAACCGCAGG CCGTTCGGGC CTCGATCGCC ATGACAGGGC AGTTCGCCTC GCTCGACGAG
GATCTCACCG GACGCGAGAA CCTGCTGATG CTGGCCCGGC TCTGGGGGTT CGGGTTGCGC
GCCTCGCGCC AGCGGGCGGA CGAGTTGCTG GCCGCCTTCG ATCTGGCCGA CGCCGGGCGC
AAGCAGGTCA AGGACTATTC CGGCGGCATG CGCCGGCGGC TCGACATCGC CGCCTCGCTG
ATCGTGACGC CGGGGGTGCT GTTCCTCGAC GAGCCCACGA CGGGGCTCGA TCCTTCGGCG
CGGCAGGGCA TCTGGCGGCT GATCCGGCAG CTCGCCGCCT CGGGCGTCAC CATCCTGCTG
ACGACGCAAT ATCTGGAGGA GGCCGACCAG CTGGCCGACC GGATCATGGT GATCGACCAT
GGACGCAAGA TCGCCGAGGG CACCAGCCGC GAGCTGAAGG CCGCGACCGG GTCGGGCGTT
CTGCATGTGA CGCTGGCCGA TCCTGCGGGG CTCGATGCGG CCGAGCGGCT CCTGTCGGAG
CGTCTGGGAG GCGTGGTGCA GCGCAATCCC GAGGGCGCCA CGCTCTCGGT CAAGGTGAGC
AGCGCCGCCG CCGCCCACGC AGCCATGGCC GATCTGATCG CCGCGGGCCT CGAACCCAGC
GATTTCTCGA TGGGCCAGCC CAGCCTTGAC GAGGTCTTCT TCGCGCTCAC CTCGGCACCC
GCCAGGGGCG CGCCACCGGC AGGAACGACA CGATGA
|
|---|
| Protein sequence | MTDPAEAPGK AGLAVQARGL VCRFGTMTAV AGIDLDVPRG TIFAILGPNG AGKTSLLRML
STLHVPDAGR ATIMGHDLGR EPQAVRASIA MTGQFASLDE DLTGRENLLM LARLWGFGLR
ASRQRADELL AAFDLADAGR KQVKDYSGGM RRRLDIAASL IVTPGVLFLD EPTTGLDPSA
RQGIWRLIRQ LAASGVTILL TTQYLEEADQ LADRIMVIDH GRKIAEGTSR ELKAATGSGV
LHVTLADPAG LDAAERLLSE RLGGVVQRNP EGATLSVKVS SAAAAHAAMA DLIAAGLEPS
DFSMGQPSLD EVFFALTSAP ARGAPPAGTT R
|
|---|
| |