| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3253 |
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| Symbol | |
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| ID | 5086002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 122102 |
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| End bp | 122899 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640484825 |
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| Product | ABC transporter related |
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| Protein accession | YP_001169442 |
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| Protein GI | 146279284 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00665342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.245763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT TGCGGTTCCT TCGGCACGCG GAGCGCCCCA CGCGCCCGTC CCGCCTCTCG
AACGCGCTGG TCTTCGGATG GCGGGCGGTG CTGAAGTTCC GCCACCTGCC CGAGCAGCTG
TTCGATCTCG TCATGACGCC GATCATGTTC ACGCTGCTCT TTACCTTCGT GTTCGGCGGC
GCCCTTGCGG GATCCCCGCG CGAGTACCTG CAGTTCTTCC TTCCGGGTAT CCTGGTGCAG
ACCGTCGTCT TCAACTCGGT CTATTCGGGC ATGGGGCTTT CGACCGATTT CCAGAAGGGC
CTGTTCGATC GGTTCCGCAC GCTGCCGATC TGGTCCCTCG CGCCCTTTGC GGGCCTGATG
GTCGGCGACA TCCTGCGCCA TCTGATCGCG GGCGTGATCA TCCTGGCCAT CGGCCTCGCG
CTTGGCTACC GGCCCGAGGC CGGGGTGGCG GGCGTTCTGG CGGCGTTTCT CATGCTGATC
AGCATCGGCT TTGGCATGGG CTGGATCTTT CTGGTGCTCG GGATGCTCGT CCGCACGCCG
ATGACCGTGA TGACGCTGGG CTTCACCATC CTGTTTCCGG TCACCTTCGC CTCCAACATC
ATGGTCGATC CGGCGACGAT GCCCGGCTGG CTGCGCGGCT TCGTCGAGGT GAACCCCGTG
TCCCTCATGG CGACGGCCTT GCGCGGGCTG ATGGCGGGCA CCGCCGACGC GACGCAGATC
CTCGTGGCGC TCATCGCCCC GGCGGTGCTG ACGCTGCTTC TCGCGCCGCT GACGGTCTGG
CTCTACCGGC GCCGGTAG
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| Protein sequence | MSDLRFLRHA ERPTRPSRLS NALVFGWRAV LKFRHLPEQL FDLVMTPIMF TLLFTFVFGG
ALAGSPREYL QFFLPGILVQ TVVFNSVYSG MGLSTDFQKG LFDRFRTLPI WSLAPFAGLM
VGDILRHLIA GVIILAIGLA LGYRPEAGVA GVLAAFLMLI SIGFGMGWIF LVLGMLVRTP
MTVMTLGFTI LFPVTFASNI MVDPATMPGW LRGFVEVNPV SLMATALRGL MAGTADATQI
LVALIAPAVL TLLLAPLTVW LYRRR
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