Gene Rsph17025_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3226 
Symbol 
ID5085975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp89987 
End bp92077 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content64% 
IMG OID640484798 
Productbacterioferritin 
Protein accessionYP_001169415 
Protein GI146279257 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA TTGCGACTGA GCCGGAATCT GAGCCGGTAC CCCTGAGCAA GTGGCTCTGG 
CGCTCCTATC TGAAGGCGGC ACTCGTCCCG CTCCTGCTGA TCGAATTCGG CTTCATCGGG
GTCTATCTCT TGACGAGCCA GGTGGTCTAT GACCGCAGCG CCTCGGCGAT CACGCGCATC
TCGACGACGA TGCTGCGCGA CGACTCGATC CGCGAGGCCA ACATCATCGC CCACCGCCTT
CAGAGCATCA GTGCCGCCAC CCAGATCTAT GCCGATGAAT CCGGCCGCGC CCTCGCCACT
CCCGCTGACG TTCCCGAGTC GTTGAAGGCC GTGCACGGCT ATTCGCCGGA TGGTGTCTTC
TACACCAAGA AGGACACCGG CGGATCGGCG GTCTTCTATT CCGGTGTCGT CCCGATCGGC
GAGGCGGAAC AGGAAAAGGT CTGGCGCACC GTCCGGCTGG ATCCGCTGAT GAAATCCATC
AAGGAGAGCG ATTCGCTCAT TTCGCAACTC TATCTCAATA CCTGGGATTC CTATAACCGG
ATCTATCCCT ACTTCGACGT GCTGAACATC TACGCGCCGA AGATGGATAT CCCCACCTAC
AACTTCTACT ACGAGGCCGA CGACGTTCAC AATCCGGCCC GAAAGCCGGT CTGGACCGAC
GCCTATGTCG ACCCCGCGGG CGATGGCTGG ATGGTCTCGT CGATCGCGCC CGTCCATGGC
CCGGAAAAGC TCGAGGCCGT CGTGGGCATC GACGTCACGG TCAAGACGAT CGTCGAGCAG
GTGCTCAACA TAAAGCTGCC CGGTGACGGC TTTGCCATCC TGATCGGTCG TGACGGCACG
ATCCTCGCCC TGCCGCCCGA GGGCGAGGAC GATCTCGGCG TGAACGAGCT GATCGGCCAC
AGCTATGCCG AGGCGATCCT GCAGGACACG TTCAAGCCGG CCGAGTTCAA CATCTTCCGC
CGCCCGGACC TGTCGGCCAT CGCGCTCGAG ATGCAGTCGC AGCCATCGGG CGTCCAGCGC
GTCGAGTTGC AGGAGCCGAT GATCGCCGCC TGGTCCACCA TCGCAGGCCC CAACTGGCGG
CTCCTGCTGT TGAGCAGCGA GAAGAGCCTG CTGGCCGAAG CCACCAACCT GCGCAGCCAG
CTCGGGTTCG TCAGCACGAT CATGGTGGCG ATCCTTGTCC TGTTCTATGC CGTCTTCTTT
GCCTACCTCT GGCGGCGGTC CATCACGATG AGCGCCCGCG TCGCGCGGCC GCTTGCCGAT
CTCGAGCAGC GCATGGTGCT GATCAGCGAG GGCAACACCG TTCCGCCCTC GCCGCCCTTC
GCGATCCGCG AGCTTCAGAC GGTGGGCGAG CATCTGGCCA CGATGGGCGA CAAGCTCGAC
GCGGCGAACC GGGCCAAGTC GAACTTCCTC TCGGCCATGA GCCACGAGCT GAGGACCCCC
CTGACGGCCA TCATCGGCTA TGCCGAGCTT CTGGAGGCGT CGGAGGGCCG CAAGCTCGAG
GGAGAGCGGA TGAACCATGT CCGGGCCATT TCCTCCTCGG GGTGGAGCCT GGTGAAGCTT
GTCGATGCGG TGCTCGAACT CAGCCGCCTG GATCACAAGG ATCTGCGGCT CTCCACCCGT
TCGCTGGACC TTGCCCCCCT CGTGCGGGAA GCCTGCGAGC GTGCACGCCC CGATGCCGAC
CGGATGCAGG TCACGCTGCG AATCGACGAA CCGGACGAGC CGCTGCCGTC GGTGATCGGC
GATCCGGGAA TGCTGCGGCG CATCCTCGAT CAGCTCCTGT CGAACGCGGT GAAATACAAC
GTGCCGGGCG GCCGGGTCGA TGTCGGTTTC GACCTCGCCT CACCCGACAG CGTGGCGCTT
GAGGTCCGCG ACACGGGGCT GGGCATCGCG CAGGATCGGC AGTCGGATGT CTTCAAGGCC
TTCCAGCGGC TGGGGCACGA GAACGGTGCG ATCAGCGGCG CCGGCATCGG CATGACCATC
GCCCAGCGGC TGGCCGAAGT CACCGGCTGC AACCTGCACT TCGAGAGTGA GCCCGGCAAG
GGGTCGACCT TCGTGTTGCG CATTCCCCGC ACCCGGCAGG GCCGTGTCTG A
 
Protein sequence
MARIATEPES EPVPLSKWLW RSYLKAALVP LLLIEFGFIG VYLLTSQVVY DRSASAITRI 
STTMLRDDSI REANIIAHRL QSISAATQIY ADESGRALAT PADVPESLKA VHGYSPDGVF
YTKKDTGGSA VFYSGVVPIG EAEQEKVWRT VRLDPLMKSI KESDSLISQL YLNTWDSYNR
IYPYFDVLNI YAPKMDIPTY NFYYEADDVH NPARKPVWTD AYVDPAGDGW MVSSIAPVHG
PEKLEAVVGI DVTVKTIVEQ VLNIKLPGDG FAILIGRDGT ILALPPEGED DLGVNELIGH
SYAEAILQDT FKPAEFNIFR RPDLSAIALE MQSQPSGVQR VELQEPMIAA WSTIAGPNWR
LLLLSSEKSL LAEATNLRSQ LGFVSTIMVA ILVLFYAVFF AYLWRRSITM SARVARPLAD
LEQRMVLISE GNTVPPSPPF AIRELQTVGE HLATMGDKLD AANRAKSNFL SAMSHELRTP
LTAIIGYAEL LEASEGRKLE GERMNHVRAI SSSGWSLVKL VDAVLELSRL DHKDLRLSTR
SLDLAPLVRE ACERARPDAD RMQVTLRIDE PDEPLPSVIG DPGMLRRILD QLLSNAVKYN
VPGGRVDVGF DLASPDSVAL EVRDTGLGIA QDRQSDVFKA FQRLGHENGA ISGAGIGMTI
AQRLAEVTGC NLHFESEPGK GSTFVLRIPR TRQGRV