Gene Rsph17025_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3222 
Symbol 
ID5085971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp85399 
End bp87885 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content66% 
IMG OID640484794 
Productnitrate reductase catalytic subunit 
Protein accessionYP_001169411 
Protein GI146279253 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.497822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT CCTCTTCGCG CCGCTCGTTC CTGAAGGCCA CCGCCGCGGC GGCGACGGCC 
TCGGCGGCCG GCATTCCGCT GGCCGGCCCG GCCCTGGCCG AAGCGGCCGA CGGCATCCGC
TGGGACAAGG CCGCCTGCCG CTTCTGCGGC ACCGGCTGCT CGGTTCTGGT GGGCGTCAAG
GACGGCCGCG TGGTGGCGAC CCAGGGCGAT CCCGAGGCGC CGGTGAACCG CGGCCTCAAC
TGCATCAAGG GCTATTTCCT GTCCAAGATC ATGTATGGCA AGGACCGGCT GACCACGCCG
CTCCTGCGCA AGACGAACGG CGTCTACGAC AAGAACGGCG AGTTCGTCCC GGTCTCGTGG
GACGAGGCCT TCGACATCAT GGCCGAGAAG TGGAAGGCCA CGCTGAAGGC CAAGGGGCCG
GAAGCCATCG GCATGTTCGG CTCGGGCCAG TGGACGATCT GGGAAGGCTA CGCCGCGGCC
AAGCTGATGA AGGCGGGCTT CCGGTCGAAC AACCTCGATC CGAACGCGCG GCACTGCATG
GCCTCGGCGG TGGCGGCCTT CATGCGGACC TTCGGCATCG ACGAGCCGAT GGGCTGCTAT
GACGACCTCG AGGCTGCGGA CACGTTCGTG CTCTGGGGCT CGAACATGGC CGAGATGCAC
CCGATCCTGT GGTCGCGCAT CACCGACACC CGCCTGACGA AGCCCGGCTG CGAAGTCCAC
GTCCTTTCGA CCTTCGAGCA CCGCTCGTTC GAGCTGGCCG ACAACGGGAT GATCTTCACG
CCCCAGACCG ACCTCGCGAT CCTGAACTAC ATCGCGAACT ACATCATCCA GAACGGCGCC
GTGAACTGGG ACTTCGTGAA CAAGCACACG ACGTTCTTCA AGACCAAGAC CGACATCGGC
TACGGCCTGC GCCCGACCCA CGCGCTGGAG GACGGCGTCG ATCCCAAGAC CACCGGCGAC
ATGGAGCCGA TCACTTTCGA GGAGTTCAAG GCCGCCGTCG CCGACTACAC GCTGGAGAAG
GTCGCGGCGC TTTCGGGCGT GCCGGCCGAA AAGCTCGAAC GGCTGGCGAA GCAGTACGCC
GATCCGAACC GCAAGGTCAT GTCGCTCTGG ACGATGGGCT TCAACCAGCA CACCCGCGGC
TCGTGGGTGA ACTCGAACTG CTACAACGTT CACCTGCTGG TCGGAAAGAT CTCGGAGCCG
GGCAACTCGC CCTTCTCGCT GACGGGCCAG CCGTCGGCCT GCGGCACCGC GCGCGAGGTC
GGCACCTTCT CGCACCGCCT GCCCGCCGAC ATGGTGGTGA CGAACCCCGA GCACCGCGCC
CACACCGAGG AACTCTGGGG CCTGCCCGAT GGCACGATCC CGGAAAAGCC CGGCGCCCAT
GCGGTCCTGC AGAACCGGAT GCTGAAGGAC GGCAAGATCA ACGCCTACTG GGTGCAGTGC
AACAACAACA TGCAGGCCGC GCCCAACATG AACGAGGAAG GCTGGCCGGG CTACCGCAAC
CCCGAGAACT TCATCGTCGT CTCCGACCCC TACCCGACCG TCACCACGAT GGCCGCCGAC
CTGATCCTGC CCACCGCCAT GTGGGTCGAG AAGGAAGGCG CCTACGGCAA CGCCGAGCGG
CGCACCCAGT TCTGGCGCCA GCAGGTGGAC GCTCCCGGCG AGGCGCGCTC GGACCTGTGG
CAGCTGGTCG AGTTCTCGAA GCGTTTCACG GTCGATGAGG TCTGGCCGGC CGAGTTGCTG
GACAAGAAAC CCGAACTGCG CGGCAAGACG CTTTACGAGG TGCTCTATGC CAACGGCGTG
GTGAACCGCT TCCCGCTCGA AGAGACCGCC CAGGGCTTCG GCAACCAGGA GAGCCGCGAC
TTCGGCTTCT ACCTGCAGAA GGGCCTGTTC GAGGAATATG CGGCCTTCGG TCGCGATCAT
GGCCACGACC TCGCCGACTT CCAGACCTAT CACCAGGCCC GCGGCCTGCG CTGGCCGGTC
GTGGATGGCA AGGAAACGCT CTACCGCTTC CGCGAAGGCT ATGACCCCTA TGTGAAGCCC
GGCGAGGGCG TGAAGTTCTA CGGCAACAAG GACGGCAAGG CCAAGATCAT CTTCGCCCCC
TACGAGCCGC CGGCCGAGAT CCCGGACGCC GAGTTCGACC TGTGGCTGGT CACGGGGCGG
GTGCTGGAAC ACTGGCATTC GGGCTCGATG ACGCGCCGGG TGCCGGAACT GCACCGCGCC
TTCCCCTCGG CCGTGGTCTT CATGCACCCC GAGGATGCCG AGGCGCGGGG CCTCAAGCGC
GGGCAGGAGA TCGAGATCTC GACCCGCCGC GGCCGGATGC TGAGCCGCAT CGAGACCCGC
GGTCGCAACA AGATGCCGAA GGGTCTGGTG TTCGTCCCGT GGTTCGACGA GGGGCAGCTG
ATCAACCAGC TCACGCTCGA TGCGACCTGC CCGATCTCAA AGGAGACCGA CTACAAGAAA
TGCGCCTGCA AGGTGGAGCG CGCCTGA
 
Protein sequence
MTLSSSRRSF LKATAAAATA SAAGIPLAGP ALAEAADGIR WDKAACRFCG TGCSVLVGVK 
DGRVVATQGD PEAPVNRGLN CIKGYFLSKI MYGKDRLTTP LLRKTNGVYD KNGEFVPVSW
DEAFDIMAEK WKATLKAKGP EAIGMFGSGQ WTIWEGYAAA KLMKAGFRSN NLDPNARHCM
ASAVAAFMRT FGIDEPMGCY DDLEAADTFV LWGSNMAEMH PILWSRITDT RLTKPGCEVH
VLSTFEHRSF ELADNGMIFT PQTDLAILNY IANYIIQNGA VNWDFVNKHT TFFKTKTDIG
YGLRPTHALE DGVDPKTTGD MEPITFEEFK AAVADYTLEK VAALSGVPAE KLERLAKQYA
DPNRKVMSLW TMGFNQHTRG SWVNSNCYNV HLLVGKISEP GNSPFSLTGQ PSACGTAREV
GTFSHRLPAD MVVTNPEHRA HTEELWGLPD GTIPEKPGAH AVLQNRMLKD GKINAYWVQC
NNNMQAAPNM NEEGWPGYRN PENFIVVSDP YPTVTTMAAD LILPTAMWVE KEGAYGNAER
RTQFWRQQVD APGEARSDLW QLVEFSKRFT VDEVWPAELL DKKPELRGKT LYEVLYANGV
VNRFPLEETA QGFGNQESRD FGFYLQKGLF EEYAAFGRDH GHDLADFQTY HQARGLRWPV
VDGKETLYRF REGYDPYVKP GEGVKFYGNK DGKAKIIFAP YEPPAEIPDA EFDLWLVTGR
VLEHWHSGSM TRRVPELHRA FPSAVVFMHP EDAEARGLKR GQEIEISTRR GRMLSRIETR
GRNKMPKGLV FVPWFDEGQL INQLTLDATC PISKETDYKK CACKVERA