Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3222 |
Symbol | |
ID | 5085971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 85399 |
End bp | 87885 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484794 |
Product | nitrate reductase catalytic subunit |
Protein accession | YP_001169411 |
Protein GI | 146279253 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.497822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTT CCTCTTCGCG CCGCTCGTTC CTGAAGGCCA CCGCCGCGGC GGCGACGGCC TCGGCGGCCG GCATTCCGCT GGCCGGCCCG GCCCTGGCCG AAGCGGCCGA CGGCATCCGC TGGGACAAGG CCGCCTGCCG CTTCTGCGGC ACCGGCTGCT CGGTTCTGGT GGGCGTCAAG GACGGCCGCG TGGTGGCGAC CCAGGGCGAT CCCGAGGCGC CGGTGAACCG CGGCCTCAAC TGCATCAAGG GCTATTTCCT GTCCAAGATC ATGTATGGCA AGGACCGGCT GACCACGCCG CTCCTGCGCA AGACGAACGG CGTCTACGAC AAGAACGGCG AGTTCGTCCC GGTCTCGTGG GACGAGGCCT TCGACATCAT GGCCGAGAAG TGGAAGGCCA CGCTGAAGGC CAAGGGGCCG GAAGCCATCG GCATGTTCGG CTCGGGCCAG TGGACGATCT GGGAAGGCTA CGCCGCGGCC AAGCTGATGA AGGCGGGCTT CCGGTCGAAC AACCTCGATC CGAACGCGCG GCACTGCATG GCCTCGGCGG TGGCGGCCTT CATGCGGACC TTCGGCATCG ACGAGCCGAT GGGCTGCTAT GACGACCTCG AGGCTGCGGA CACGTTCGTG CTCTGGGGCT CGAACATGGC CGAGATGCAC CCGATCCTGT GGTCGCGCAT CACCGACACC CGCCTGACGA AGCCCGGCTG CGAAGTCCAC GTCCTTTCGA CCTTCGAGCA CCGCTCGTTC GAGCTGGCCG ACAACGGGAT GATCTTCACG CCCCAGACCG ACCTCGCGAT CCTGAACTAC ATCGCGAACT ACATCATCCA GAACGGCGCC GTGAACTGGG ACTTCGTGAA CAAGCACACG ACGTTCTTCA AGACCAAGAC CGACATCGGC TACGGCCTGC GCCCGACCCA CGCGCTGGAG GACGGCGTCG ATCCCAAGAC CACCGGCGAC ATGGAGCCGA TCACTTTCGA GGAGTTCAAG GCCGCCGTCG CCGACTACAC GCTGGAGAAG GTCGCGGCGC TTTCGGGCGT GCCGGCCGAA AAGCTCGAAC GGCTGGCGAA GCAGTACGCC GATCCGAACC GCAAGGTCAT GTCGCTCTGG ACGATGGGCT TCAACCAGCA CACCCGCGGC TCGTGGGTGA ACTCGAACTG CTACAACGTT CACCTGCTGG TCGGAAAGAT CTCGGAGCCG GGCAACTCGC CCTTCTCGCT GACGGGCCAG CCGTCGGCCT GCGGCACCGC GCGCGAGGTC GGCACCTTCT CGCACCGCCT GCCCGCCGAC ATGGTGGTGA CGAACCCCGA GCACCGCGCC CACACCGAGG AACTCTGGGG CCTGCCCGAT GGCACGATCC CGGAAAAGCC CGGCGCCCAT GCGGTCCTGC AGAACCGGAT GCTGAAGGAC GGCAAGATCA ACGCCTACTG GGTGCAGTGC AACAACAACA TGCAGGCCGC GCCCAACATG AACGAGGAAG GCTGGCCGGG CTACCGCAAC CCCGAGAACT TCATCGTCGT CTCCGACCCC TACCCGACCG TCACCACGAT GGCCGCCGAC CTGATCCTGC CCACCGCCAT GTGGGTCGAG AAGGAAGGCG CCTACGGCAA CGCCGAGCGG CGCACCCAGT TCTGGCGCCA GCAGGTGGAC GCTCCCGGCG AGGCGCGCTC GGACCTGTGG CAGCTGGTCG AGTTCTCGAA GCGTTTCACG GTCGATGAGG TCTGGCCGGC CGAGTTGCTG GACAAGAAAC CCGAACTGCG CGGCAAGACG CTTTACGAGG TGCTCTATGC CAACGGCGTG GTGAACCGCT TCCCGCTCGA AGAGACCGCC CAGGGCTTCG GCAACCAGGA GAGCCGCGAC TTCGGCTTCT ACCTGCAGAA GGGCCTGTTC GAGGAATATG CGGCCTTCGG TCGCGATCAT GGCCACGACC TCGCCGACTT CCAGACCTAT CACCAGGCCC GCGGCCTGCG CTGGCCGGTC GTGGATGGCA AGGAAACGCT CTACCGCTTC CGCGAAGGCT ATGACCCCTA TGTGAAGCCC GGCGAGGGCG TGAAGTTCTA CGGCAACAAG GACGGCAAGG CCAAGATCAT CTTCGCCCCC TACGAGCCGC CGGCCGAGAT CCCGGACGCC GAGTTCGACC TGTGGCTGGT CACGGGGCGG GTGCTGGAAC ACTGGCATTC GGGCTCGATG ACGCGCCGGG TGCCGGAACT GCACCGCGCC TTCCCCTCGG CCGTGGTCTT CATGCACCCC GAGGATGCCG AGGCGCGGGG CCTCAAGCGC GGGCAGGAGA TCGAGATCTC GACCCGCCGC GGCCGGATGC TGAGCCGCAT CGAGACCCGC GGTCGCAACA AGATGCCGAA GGGTCTGGTG TTCGTCCCGT GGTTCGACGA GGGGCAGCTG ATCAACCAGC TCACGCTCGA TGCGACCTGC CCGATCTCAA AGGAGACCGA CTACAAGAAA TGCGCCTGCA AGGTGGAGCG CGCCTGA
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Protein sequence | MTLSSSRRSF LKATAAAATA SAAGIPLAGP ALAEAADGIR WDKAACRFCG TGCSVLVGVK DGRVVATQGD PEAPVNRGLN CIKGYFLSKI MYGKDRLTTP LLRKTNGVYD KNGEFVPVSW DEAFDIMAEK WKATLKAKGP EAIGMFGSGQ WTIWEGYAAA KLMKAGFRSN NLDPNARHCM ASAVAAFMRT FGIDEPMGCY DDLEAADTFV LWGSNMAEMH PILWSRITDT RLTKPGCEVH VLSTFEHRSF ELADNGMIFT PQTDLAILNY IANYIIQNGA VNWDFVNKHT TFFKTKTDIG YGLRPTHALE DGVDPKTTGD MEPITFEEFK AAVADYTLEK VAALSGVPAE KLERLAKQYA DPNRKVMSLW TMGFNQHTRG SWVNSNCYNV HLLVGKISEP GNSPFSLTGQ PSACGTAREV GTFSHRLPAD MVVTNPEHRA HTEELWGLPD GTIPEKPGAH AVLQNRMLKD GKINAYWVQC NNNMQAAPNM NEEGWPGYRN PENFIVVSDP YPTVTTMAAD LILPTAMWVE KEGAYGNAER RTQFWRQQVD APGEARSDLW QLVEFSKRFT VDEVWPAELL DKKPELRGKT LYEVLYANGV VNRFPLEETA QGFGNQESRD FGFYLQKGLF EEYAAFGRDH GHDLADFQTY HQARGLRWPV VDGKETLYRF REGYDPYVKP GEGVKFYGNK DGKAKIIFAP YEPPAEIPDA EFDLWLVTGR VLEHWHSGSM TRRVPELHRA FPSAVVFMHP EDAEARGLKR GQEIEISTRR GRMLSRIETR GRNKMPKGLV FVPWFDEGQL INQLTLDATC PISKETDYKK CACKVERA
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