| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3200 |
|---|
| Symbol | |
|---|
| ID | 5085949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 61037 |
|---|
| End bp | 61603 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484772 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169389 |
|---|
| Protein GI | 146279231 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.921253 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAC GCACGAGCGC GACCCATCCG CTGCAGATCG CCGAGCTGGC CGTGGGCCCC
TCGCAAGGGC GGATCGGCAT CACCTTCTGC CCCGGCAAGC AGGATGTTGC GGCGGCAACG
GGCGCCTGGG CGCGAGACCT CGGCGCCGAT CTCGATGTGA TCGCGGACTG GGGCGCCCGG
CTCGTGGTGA CGCTGGTCGA GCCGGCCGAG CTTGTCGCCC TGCGGGTGGG GCATCTTGGC
GCCGAGGTGC GGCGGCGGGG AATGGAGTGG CGCCATCTGC CGATTGCCGA TTATTCCGTG
CCGGCGCCCT CGTTCGAGGA GCAATGGCAG GTCGAGGGGC GGGCCATCCG GGCTCTGCTG
CGGTCGGGCG GCGATGTGCT GGTTCATTGC CGGGGCGGGC TGGGCCGGGC GGGGATGATC
GCCGCCCGCC TGCTGGTCGA GCTTGGCCGC GATCCCGAGC AGGCCATCCG CGACGTGCGC
AGCGTGCGCC GGGGCGCCAT TGAGACGCCC GCCCAACTCG CGCTGGTGCG AAGGACACGA
GCGATCCCCG AGGAGGCGAC CGGATGA
|
|---|
| Protein sequence | MTPRTSATHP LQIAELAVGP SQGRIGITFC PGKQDVAAAT GAWARDLGAD LDVIADWGAR
LVVTLVEPAE LVALRVGHLG AEVRRRGMEW RHLPIADYSV PAPSFEEQWQ VEGRAIRALL
RSGGDVLVHC RGGLGRAGMI AARLLVELGR DPEQAIRDVR SVRRGAIETP AQLALVRRTR
AIPEEATG
|
|---|
| |