Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3194 |
Symbol | |
ID | 5085943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 55619 |
End bp | 57178 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484766 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_001169383 |
Protein GI | 146279225 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0106168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTC CCCATTTTGC GGCCCTCTTC CGGCCGTCGC AGTTCTTCGG CATCCGCGGG GGCGTCCACC CCGAGACGCG CAAGCACCTG AGCGCCGAAA GCGCCATCGA GGACATGCCG GTCCCCACGC TGGTCAGGGT GCCGCTCCAG CAGCATATCG GCGCCGAGGC CGAGCCTCTG GTCAAGCGCG ACGATCTCGT GATGAAGGGC CAGCTGATCG GTCGGGCGCG CGGGCCGGTC TCGGCCAACA TCCATGCGCC CACCTCCGGG CGCGTGATCG CCGTGGGCCA TTTCGCGGCG CCCCATCCTT CGGGGCTGCC GATCCCGACC ATCACCATCC GCACCGACGG GCAGGACAGC TGGGGCCCGC GCCTCGGCCG CCTGCGGCCC GAGAACGCCA CGCCCGAGGA GATCGCGGCC AAGGTGGCCG AGGCGGGCAT CGTCGGCATG GGGGGCGCCA CGTTCCCCTC GGCGGTCAAG CTGAACCTGC GTGCGCGCTA CGACCTTCAC ACGCTGGTCA TCAATGGCGC GGAATGCGAG CCCTACCTGA CCTGCGACGA CCGGCTGATG CGCGAGCGCG CCGAGGAGAT TGCGGACGGC ATCGGCATCA TGGCGCGGGC GCTCGGCGTG CGGCAGATCG TGGTGGCGAT CGAGTCCAAC AAGGCCGAGG CGATCTCGGC CATGCAGCGG TTCGACCGGG CCCTCGATCT GCCGATGCGG GTGCAGGTGG TGCCGACGCA GTATCCGATG GGGTCCGAGA AACACCTGGT GAAGATCCTC ACCGGACGCG AGACGCCCGC CCGCGCCCTG ACGGCGGATC TGGGCGTAGT CGTCCACAAT GCCGCGACCG CCCATGCCGT CCATCTGGCT GTGCGCTATG GCGAGCCGCT CCTGTCGCGG GTGGTGACCG TGTCGGGCCG CGGCATCCGG CGCCCGGCGA ACGTCCGCGT CCTGATCGGC ACGCCGGTGG CCGAGGTGAT CGCCCATTGC GGTGGCCTGA CCGAAGAACC CGATCGGCTG CTTCTGGGCG GGCCGATGAT GGGCCAGCCC ATCCAGAATC TGAGGGTGCC CGTGGTCAAG GGCACGAGCG GGATCCTCGC GCTGACGACA TCCGAGACGC CCGGCTGCGA GACGATGCCC TGCATCCGCT GCGGGCGCTG CTCGCAAGCC TGCCCGGTGG GCCTCACGCC CTTCGAACTC AACGCCCGCA TCCAGGCCGA CGATCTGGAG GGGGCCGGGC GGATCGGGCT GCTGGACTGC ATCACCTGCG GCTGCTGCGC CTTTACCTGC CCGGCCAATA TCCCCCTCGT GCAGACGATC CACTACGCCA AGGGCAAGCT GGCCGAGGCG GAGGGACGCA AGCATCAGCA GGAGGAAACG AAGCGCCTCG CCGCCGCCCG GAAGGCGCGC GAGGAGGCCG CGGCCGAGGC CAAGCGGCAG ATGATGGCCA AGCGCAAGGC CGAGATGGAG GCCAAGAAGA AGCGCGAAGC CGAGGCGGCG CGCGCGGCCG CTCCACCGCC CGAGCCGCAG CCGGCCACGC AGGGAGGTGC CGCGCAATGA
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Protein sequence | MSFPHFAALF RPSQFFGIRG GVHPETRKHL SAESAIEDMP VPTLVRVPLQ QHIGAEAEPL VKRDDLVMKG QLIGRARGPV SANIHAPTSG RVIAVGHFAA PHPSGLPIPT ITIRTDGQDS WGPRLGRLRP ENATPEEIAA KVAEAGIVGM GGATFPSAVK LNLRARYDLH TLVINGAECE PYLTCDDRLM RERAEEIADG IGIMARALGV RQIVVAIESN KAEAISAMQR FDRALDLPMR VQVVPTQYPM GSEKHLVKIL TGRETPARAL TADLGVVVHN AATAHAVHLA VRYGEPLLSR VVTVSGRGIR RPANVRVLIG TPVAEVIAHC GGLTEEPDRL LLGGPMMGQP IQNLRVPVVK GTSGILALTT SETPGCETMP CIRCGRCSQA CPVGLTPFEL NARIQADDLE GAGRIGLLDC ITCGCCAFTC PANIPLVQTI HYAKGKLAEA EGRKHQQEET KRLAAARKAR EEAAAEAKRQ MMAKRKAEME AKKKREAEAA RAAAPPPEPQ PATQGGAAQ
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