Gene Rsph17025_3194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3194 
Symbol 
ID5085943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp55619 
End bp57178 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content70% 
IMG OID640484766 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_001169383 
Protein GI146279225 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID[TIGR01945] electron transport complex, RnfABCDGE type, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0106168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC CCCATTTTGC GGCCCTCTTC CGGCCGTCGC AGTTCTTCGG CATCCGCGGG 
GGCGTCCACC CCGAGACGCG CAAGCACCTG AGCGCCGAAA GCGCCATCGA GGACATGCCG
GTCCCCACGC TGGTCAGGGT GCCGCTCCAG CAGCATATCG GCGCCGAGGC CGAGCCTCTG
GTCAAGCGCG ACGATCTCGT GATGAAGGGC CAGCTGATCG GTCGGGCGCG CGGGCCGGTC
TCGGCCAACA TCCATGCGCC CACCTCCGGG CGCGTGATCG CCGTGGGCCA TTTCGCGGCG
CCCCATCCTT CGGGGCTGCC GATCCCGACC ATCACCATCC GCACCGACGG GCAGGACAGC
TGGGGCCCGC GCCTCGGCCG CCTGCGGCCC GAGAACGCCA CGCCCGAGGA GATCGCGGCC
AAGGTGGCCG AGGCGGGCAT CGTCGGCATG GGGGGCGCCA CGTTCCCCTC GGCGGTCAAG
CTGAACCTGC GTGCGCGCTA CGACCTTCAC ACGCTGGTCA TCAATGGCGC GGAATGCGAG
CCCTACCTGA CCTGCGACGA CCGGCTGATG CGCGAGCGCG CCGAGGAGAT TGCGGACGGC
ATCGGCATCA TGGCGCGGGC GCTCGGCGTG CGGCAGATCG TGGTGGCGAT CGAGTCCAAC
AAGGCCGAGG CGATCTCGGC CATGCAGCGG TTCGACCGGG CCCTCGATCT GCCGATGCGG
GTGCAGGTGG TGCCGACGCA GTATCCGATG GGGTCCGAGA AACACCTGGT GAAGATCCTC
ACCGGACGCG AGACGCCCGC CCGCGCCCTG ACGGCGGATC TGGGCGTAGT CGTCCACAAT
GCCGCGACCG CCCATGCCGT CCATCTGGCT GTGCGCTATG GCGAGCCGCT CCTGTCGCGG
GTGGTGACCG TGTCGGGCCG CGGCATCCGG CGCCCGGCGA ACGTCCGCGT CCTGATCGGC
ACGCCGGTGG CCGAGGTGAT CGCCCATTGC GGTGGCCTGA CCGAAGAACC CGATCGGCTG
CTTCTGGGCG GGCCGATGAT GGGCCAGCCC ATCCAGAATC TGAGGGTGCC CGTGGTCAAG
GGCACGAGCG GGATCCTCGC GCTGACGACA TCCGAGACGC CCGGCTGCGA GACGATGCCC
TGCATCCGCT GCGGGCGCTG CTCGCAAGCC TGCCCGGTGG GCCTCACGCC CTTCGAACTC
AACGCCCGCA TCCAGGCCGA CGATCTGGAG GGGGCCGGGC GGATCGGGCT GCTGGACTGC
ATCACCTGCG GCTGCTGCGC CTTTACCTGC CCGGCCAATA TCCCCCTCGT GCAGACGATC
CACTACGCCA AGGGCAAGCT GGCCGAGGCG GAGGGACGCA AGCATCAGCA GGAGGAAACG
AAGCGCCTCG CCGCCGCCCG GAAGGCGCGC GAGGAGGCCG CGGCCGAGGC CAAGCGGCAG
ATGATGGCCA AGCGCAAGGC CGAGATGGAG GCCAAGAAGA AGCGCGAAGC CGAGGCGGCG
CGCGCGGCCG CTCCACCGCC CGAGCCGCAG CCGGCCACGC AGGGAGGTGC CGCGCAATGA
 
Protein sequence
MSFPHFAALF RPSQFFGIRG GVHPETRKHL SAESAIEDMP VPTLVRVPLQ QHIGAEAEPL 
VKRDDLVMKG QLIGRARGPV SANIHAPTSG RVIAVGHFAA PHPSGLPIPT ITIRTDGQDS
WGPRLGRLRP ENATPEEIAA KVAEAGIVGM GGATFPSAVK LNLRARYDLH TLVINGAECE
PYLTCDDRLM RERAEEIADG IGIMARALGV RQIVVAIESN KAEAISAMQR FDRALDLPMR
VQVVPTQYPM GSEKHLVKIL TGRETPARAL TADLGVVVHN AATAHAVHLA VRYGEPLLSR
VVTVSGRGIR RPANVRVLIG TPVAEVIAHC GGLTEEPDRL LLGGPMMGQP IQNLRVPVVK
GTSGILALTT SETPGCETMP CIRCGRCSQA CPVGLTPFEL NARIQADDLE GAGRIGLLDC
ITCGCCAFTC PANIPLVQTI HYAKGKLAEA EGRKHQQEET KRLAAARKAR EEAAAEAKRQ
MMAKRKAEME AKKKREAEAA RAAAPPPEPQ PATQGGAAQ