Gene Rsph17025_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3192 
Symbol 
ID5085677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp54459 
End bp55040 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID640484764 
ProductNa(+)-translocating NADH-quinone reductase subunit E 
Protein accessionYP_001169381 
Protein GI146279223 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.150782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAT TCTTCTTCAT CCTGCTGAGC ACCGCCCTCG TGAACAACGT GGTGCTGGTC 
AAGTTTCTCG GCCTCTGCCC GTTCATGGGC GTCTCGCGCA AGACGGATGC GGCGATCGGC
ATGGGGCTTG CCACGACCTT CGTGCTGACG CTCGCCGCCG GGTCGAGCTG GATGGTCGAG
ACGCTGATCC TCGAACCGCT GGACCTTGCC TTCCTGCGGA TCCTGAGCCT GATCCTCGTC
ATCGCGGCCA TCGTGCAGTT CATCGAGGTG GTGATGCGCA AGGTCTCGCC GGCCTTGCAC
AAGGCGCTCG GGATCTACCT GCCGCTGATC ACCACCAACT GCGCCGTGCT GGGCGTGGCG
CTTCTGAACA TCCAGGAGGG GCACGGGCTC GCCTCGAGCC TGCTCTACGG CTTCGGCTCG
GCCGCGGGCT TCACCCTCGT TTTGGTGATC TTCGCCGGCA TGCGCGAGCG CCTGGCGCAA
CTCTCGGTGC CGGGGCCGTT TGCGGGTGTC CCGATCGCCT TCGTCTCTGC CGGTCTGCTG
TCGATGGCCT TCATGGGCTT TGCCGGCCTG ACCCCGAACT GA
 
Protein sequence
MGEFFFILLS TALVNNVVLV KFLGLCPFMG VSRKTDAAIG MGLATTFVLT LAAGSSWMVE 
TLILEPLDLA FLRILSLILV IAAIVQFIEV VMRKVSPALH KALGIYLPLI TTNCAVLGVA
LLNIQEGHGL ASSLLYGFGS AAGFTLVLVI FAGMRERLAQ LSVPGPFAGV PIAFVSAGLL
SMAFMGFAGL TPN