Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3192 |
Symbol | |
ID | 5085677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 54459 |
End bp | 55040 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640484764 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_001169381 |
Protein GI | 146279223 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.150782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAAT TCTTCTTCAT CCTGCTGAGC ACCGCCCTCG TGAACAACGT GGTGCTGGTC AAGTTTCTCG GCCTCTGCCC GTTCATGGGC GTCTCGCGCA AGACGGATGC GGCGATCGGC ATGGGGCTTG CCACGACCTT CGTGCTGACG CTCGCCGCCG GGTCGAGCTG GATGGTCGAG ACGCTGATCC TCGAACCGCT GGACCTTGCC TTCCTGCGGA TCCTGAGCCT GATCCTCGTC ATCGCGGCCA TCGTGCAGTT CATCGAGGTG GTGATGCGCA AGGTCTCGCC GGCCTTGCAC AAGGCGCTCG GGATCTACCT GCCGCTGATC ACCACCAACT GCGCCGTGCT GGGCGTGGCG CTTCTGAACA TCCAGGAGGG GCACGGGCTC GCCTCGAGCC TGCTCTACGG CTTCGGCTCG GCCGCGGGCT TCACCCTCGT TTTGGTGATC TTCGCCGGCA TGCGCGAGCG CCTGGCGCAA CTCTCGGTGC CGGGGCCGTT TGCGGGTGTC CCGATCGCCT TCGTCTCTGC CGGTCTGCTG TCGATGGCCT TCATGGGCTT TGCCGGCCTG ACCCCGAACT GA
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Protein sequence | MGEFFFILLS TALVNNVVLV KFLGLCPFMG VSRKTDAAIG MGLATTFVLT LAAGSSWMVE TLILEPLDLA FLRILSLILV IAAIVQFIEV VMRKVSPALH KALGIYLPLI TTNCAVLGVA LLNIQEGHGL ASSLLYGFGS AAGFTLVLVI FAGMRERLAQ LSVPGPFAGV PIAFVSAGLL SMAFMGFAGL TPN
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