Gene Rsph17025_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3186 
Symbol 
ID5085671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp50017 
End bp50559 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID640484758 
Producthypothetical protein 
Protein accessionYP_001169375 
Protein GI146279217 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.155637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.897165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA TCGGGCTCTT CTTCGGCACG GATACCGGCA AGACGCGCAA GGTCGCGCGA 
CAGATCAAGG CCCTGTTCGA CGACGGGCTG ATGGCCAAGC CGGTCAACGT CAACCGCGCC
GAGGTCGAAA CCTTCATGAG CTATGACTAT CTGATCCTGG GCACGCCGAC GATGGGCGAG
GGCCAGCTTC CAGGCGCCAG CGCCGACTGT GCCGAGGAAA GCTGGGAGGA GTTCCTGCCC
AGGCTCGAGG ATCGGGACTT CACCGGCAAG ACCATCGCGA TCTTCGGCCT CGGCGATCAG
GTCACCTATC CGCTGGAGTT CGTGAACGCC ATCTTCATCC TGGCCGACTT CTTCGAGAGC
CGCGGCGCCA CGATCGTGGG CCGCTGGCCG GTCGAGGGCT ATGAGTTCGA GGAGTCGCTT
GCGGTGGTGG ACGGCGCGTT TATGGGGCTC GCCCTCGATC TCGACAACCA GTCCGAGCAA
ACCGAGGCCC GGCTCGCGGG ATGGCTGAAG AGCATCTCGG ACAGCTTCGG CCTGCCCGTC
TGA
 
Protein sequence
MTRIGLFFGT DTGKTRKVAR QIKALFDDGL MAKPVNVNRA EVETFMSYDY LILGTPTMGE 
GQLPGASADC AEESWEEFLP RLEDRDFTGK TIAIFGLGDQ VTYPLEFVNA IFILADFFES
RGATIVGRWP VEGYEFEESL AVVDGAFMGL ALDLDNQSEQ TEARLAGWLK SISDSFGLPV