Gene Rsph17025_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3181 
Symbol 
ID5085666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp42796 
End bp44898 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content66% 
IMG OID640484753 
Producthypothetical protein 
Protein accessionYP_001169370 
Protein GI146279212 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2015] Alkyl sulfatase and related hydrolases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA CCAGACGACA GATCCTCACG ACGCTTCCCG TCACTGGCGC GGCCTTCGCG 
CTTGGCGGCA ACTTCCTCGA AGAAGGCACG GCGCGGGCGC AGGGCGTGCG CGCGCCCCTC
GAGGGACATT TCCACCCGAA GGGCAAGGCG CCCTCCGCGC ATACGATGAA GGTGCTGGCA
GAGGCGCGCA AGGGGCTGCC CTTCTCGGAT CGCCGTGACA TCGAAGAGCA GGCGCGCGGG
CTGATCGCCG AGCGTGCCGC CCCTCAGATC ATGGGCGACG CGGGCAACGT GGCCTTCGAC
CGCAGCGAAT ACGACTTCCT CGACGGGAAC GATGACTTCG ACAGCATCCA TCCGTCGATG
ACGCGCATCG CGCGGCTGAA CAACCACTTC GGGATCTATG AGGTGATCCC CGGCATCTAC
CAGGTGCGCG GCCTGGATCT TTCCCACATG AGTTTCGTCC GCGGCAAGAC CGGCTGGATC
GTCTTCGACA CGCTGACCAC GACAGAGACC GCACGCGCCG CCTGGGAGCT GTTCCAGGAG
CACAGGGGCG AGGGGCTGCC GGTCACCGCT GTGATCTACT CCCACACCCA CGCGGACCAC
TGGGGCGGCG TTCGCAGCCT CGTCGCCGAG GAGGATGTGG CCGCGGGCCG GGTGGAGATC
ATCGCGCCCG ACGGCTTCAT GCAGTTCCTG ATCTCGGAGA ACGTCTTTGC CGGCAACGCG
ATGAACCGGC GGCTGTTCTA TCAGTATGGG TTGCTTCTGC CGGTCGCGCC CCACGGCTTC
GTCACCCAGG GTTTGGGGCA CCGGGTTCCG GCGGGCGTGA ACGGGCTGAT CCCGCCCACC
CGCCTGGTTT CGGAACCGAT CGAGGAGTTC GAGGTCGATG GCGTGCGGAT GATCTTCCAG
AACACGCCGA ACACCGAGGC GCCTCGGGAG ATGAACACCT ACATCCCCGA CCTCAAGGCG
CTGTGGATGG CCGAGAACGT GACCGCCCAG CTCCACAACA TCTACACGCT GCGCGGGGCG
CCGGTCCGCG ACCCGCTCAA CTGGTCGAAA TACATCAACG AGGCGCTCTA CCGTTTCGGG
CAGGAGGCGG AGGTGATGTT CGCCTCGCAC CACTGGCCGC GCTGGGGCAA CGAGCGCATC
CGCGAGATCC TGCGCGACCA GCGCGACCTC TACGCCAACA TGAACAACCA GGTTCTGCAC
TACGCCAACC AGGGCGTCAC CATCAACCAG GTCCACAACG TCTATCGGAT GCCCGAGAGC
CTGCAGGCCA AATGGCACTG CCGGGGCTAC CACGGCTCTC CCCAGCACAA TGCGCGCGGC
GTGATCCAGC GTTACCTCGG CTTCTGGGAC TGCAACCCGA CCACGCTGAT CCCGCTTTCG
CCCGCCGACT CGGCGCCGCT CCATGTCGAG ATGATGGGCG GCGGCGCGGC GATCCTCGCG
AAGGCGGGCG AACTGCACGA AGCGGGTGAC TATTTCCGCG CGACCGAGAT CCTCGACAAG
CTGGTTCAGG CCGAACCGGG CAACGGCGAG GCCAGGGATG CGCTCGCCGA CGCCTTCGAG
CAGATCGGGT ATCAGCAGGA GAATCCGGGG CTCCGGAACA GCTTCCTCGC GGCGGCCTAT
GAGTTGCGCT CGGGCATCCC GCAGGGGGCG ATGGTCAGCA GCTCCAGCCC CGACGTCATC
CGCGGCATGT CCACCGAACT GTTCCTGAAC TTCCTTGCCA TCCGCATGGA TGGCCGCCGC
GCCACCGGTC TTGCCTTCGT CATGAATCTC GAGACTCCCG ATACGGGTGA GACCTTCGTG
GTCGAGCTTG CCAACGAGAC GCTCACGAAC ATCGCAGGCT TCCGCGCGGA CGCAGCCGAC
CTGACCCTGA AGGTGAACCG TGCCGACCTC GAGCGCGTCA TGGCGGGACA GAGCGGGCTG
GACGCGCTGC TGGCCGACGG CACCGCGCAG GCCGAGGGCG ATGTCGCGAT CCTCGAACGG
CTTGCGGGTC TCATGGTCGA GTTCGACCCC CGCTTCGAGA TCATGCCCGG CACGGCAAAG
CGCACCGAGC TTGCGGCGGC CCAGCCCTTC GAATGCGACA TCGGGGCGCC GATCGCGGAG
TGA
 
Protein sequence
MMTTRRQILT TLPVTGAAFA LGGNFLEEGT ARAQGVRAPL EGHFHPKGKA PSAHTMKVLA 
EARKGLPFSD RRDIEEQARG LIAERAAPQI MGDAGNVAFD RSEYDFLDGN DDFDSIHPSM
TRIARLNNHF GIYEVIPGIY QVRGLDLSHM SFVRGKTGWI VFDTLTTTET ARAAWELFQE
HRGEGLPVTA VIYSHTHADH WGGVRSLVAE EDVAAGRVEI IAPDGFMQFL ISENVFAGNA
MNRRLFYQYG LLLPVAPHGF VTQGLGHRVP AGVNGLIPPT RLVSEPIEEF EVDGVRMIFQ
NTPNTEAPRE MNTYIPDLKA LWMAENVTAQ LHNIYTLRGA PVRDPLNWSK YINEALYRFG
QEAEVMFASH HWPRWGNERI REILRDQRDL YANMNNQVLH YANQGVTINQ VHNVYRMPES
LQAKWHCRGY HGSPQHNARG VIQRYLGFWD CNPTTLIPLS PADSAPLHVE MMGGGAAILA
KAGELHEAGD YFRATEILDK LVQAEPGNGE ARDALADAFE QIGYQQENPG LRNSFLAAAY
ELRSGIPQGA MVSSSSPDVI RGMSTELFLN FLAIRMDGRR ATGLAFVMNL ETPDTGETFV
VELANETLTN IAGFRADAAD LTLKVNRADL ERVMAGQSGL DALLADGTAQ AEGDVAILER
LAGLMVEFDP RFEIMPGTAK RTELAAAQPF ECDIGAPIAE