Gene Rsph17025_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3178 
Symbol 
ID5085663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp39799 
End bp40806 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID640484750 
Producthypothetical protein 
Protein accessionYP_001169367 
Protein GI146279209 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID[TIGR02994] ectoine utilization protein EutE 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.860392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG ACCTGCGGCC GTCGCCGATC TCGGCGACGG TGGATTTCGA CTCGCCGGGC 
GTGCAGCACG GCTTCCTGCG GCTGCCCTAC AGCCGCGACG ATGCAGCCTG GGGGTCGGTC
ATGATCCCGG TGGCGGTGGT GGCGAACGGC ACCGGGCCCA CGGCGCTGCT GACCGGCGCC
AACCACGGCG ACGAATACGA GGGGCCGATC GCGCTCTTCG AACTGGCCCG GTCGCTCCGC
CCCGAGGAGG TGACGGGCCG GGTGATCATC CTGCCCGCGA TGAACCAACC CGCCTTCGCG
GCGGGCACCC GCACCTCGCC CATCGACCGC GGCAACCTGA ACCGCAGCTT TCCCGGCCGC
CCCGACGGGA CGGTCACGGA AAAGATCGCG GACTATTTCC AGCGCGTGCT GCTGCCCTTG
GCGGATGTGG TGCTGGACTT CCATTCGGGG GGCCGAACGC TCGACTTCCT GCCCTTCTGC
GCGGCGCATG TCCTGCCCGA CAAGGCGCAG GAGGCGCGCG CTTTCGATCT GGTCCGCGCC
TTCGGGGCGC CCTGGTCGGT CAAGATGCTC GAGATCGATG CGGTCGGCAT GTATGACACC
GCGGCCGAGG CGATGGGCAA GGTGTTCGTC ACGACCGAAC TGGGCGGCGG CGGGACCGCC
AGCGCGCGCA CCACCGGCAT CGCGATGCGG GGCTGCCGCA ACCTGCTGAT CGCGGCCGGC
ATCCTGCGCG GCACACCCGA ACCGCAGCCG ACGCAATGGC TCGACATGCC CGACGGTGAC
TGCTTCACCT TCGCCGAGGA TGGCGGCCTG ATCCGCTTCT GCGCCGATCT GGGCGAGCGG
GTCGAGAAGG GCCAGACGAT CGCACTGATC TATCCGGTCG CGCGGACGGG ATCAGATCCC
ACGGTGCTGA CCGCCCGGCG ATCGGGCCTC TTCACGGCCC GCCACTTCCC CGGCCTCGTC
AAGCCCGGCG ATTGCGTGGC CGTGATCGCC GACGAAGTGG AGGGCTGA
 
Protein sequence
MTADLRPSPI SATVDFDSPG VQHGFLRLPY SRDDAAWGSV MIPVAVVANG TGPTALLTGA 
NHGDEYEGPI ALFELARSLR PEEVTGRVII LPAMNQPAFA AGTRTSPIDR GNLNRSFPGR
PDGTVTEKIA DYFQRVLLPL ADVVLDFHSG GRTLDFLPFC AAHVLPDKAQ EARAFDLVRA
FGAPWSVKML EIDAVGMYDT AAEAMGKVFV TTELGGGGTA SARTTGIAMR GCRNLLIAAG
ILRGTPEPQP TQWLDMPDGD CFTFAEDGGL IRFCADLGER VEKGQTIALI YPVARTGSDP
TVLTARRSGL FTARHFPGLV KPGDCVAVIA DEVEG