Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3170 |
Symbol | |
ID | 5085655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 32868 |
End bp | 33653 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484742 |
Product | hypothetical protein |
Protein accession | YP_001169359 |
Protein GI | 146279201 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | [TIGR03005] ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAGC CGATCATCCG TATCGATCGC CTTGAGAAAT CCTTCGGCAG TCTGAAGGTA CTTGACGGCC TGTCGTTCGA CGTGATGCCG GGCGAGAAGC TGGCGCTGAT CGGGCCTTCG GGCTCGGGCA AGACCACGAT CCTGCGCATC CTGATGACGC TGGAGACCAT CACCGGCGGC CATGTCGAGG TGTGCGGCGA GCAGCTGTTC CACATGCGTC GCAACGGGGC CGAGCGGCCG GCGGACGAGG CGCACCTGCA CCACATGCGC CGCCACATCG GCATGGTGTT CCAGCACTTC AACCTGTTTC CGCACAAATG CGTGCTCGAC AACATCACGC TGGCGCCGAT CCTGACCAAG GGCGAGCCGC GGGCCGCGGC CGAGCGGCGG GCGATGGACC TGCTCGACAT GGTGGGCCTT GCCGACAAGG CCCGCGCCAT GCCCTCGCAG CTGTCGGGTG GCCAGAAGCA GCGCGTCGCG ATTGCCCGCG CGCTGGCGCT GCAGCCGCGC ATCATGCTGT TCGACGAGAT CACGAGCGCG CTCGACCCCG AACTGGTCGA GGAGGTGCTG CTGGTGATGA AGCGCCTCGC CGCCGAGACC GACATGACCA TGCTTCTCGT CACCCACGAG ATGGGCTTTG CCCACGAGTT TGCCGACCGC GTGCTGTTCT TCGACCGCGG CCGCATCGTC GAGCAGGGCC CGCCCGACCA GATCTTCACC CGTCCGACGC ATGAACGCAC CCAATCCTTC CTGCGCAAGA TCATCGCCGC AGGGCACCGC GTCTGA
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Protein sequence | MTQPIIRIDR LEKSFGSLKV LDGLSFDVMP GEKLALIGPS GSGKTTILRI LMTLETITGG HVEVCGEQLF HMRRNGAERP ADEAHLHHMR RHIGMVFQHF NLFPHKCVLD NITLAPILTK GEPRAAAERR AMDLLDMVGL ADKARAMPSQ LSGGQKQRVA IARALALQPR IMLFDEITSA LDPELVEEVL LVMKRLAAET DMTMLLVTHE MGFAHEFADR VLFFDRGRIV EQGPPDQIFT RPTHERTQSF LRKIIAAGHR V
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