Gene Rsph17025_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3170 
Symbol 
ID5085655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp32868 
End bp33653 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID640484742 
Producthypothetical protein 
Protein accessionYP_001169359 
Protein GI146279201 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID[TIGR03005] ectoine/hydroxyectoine ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGC CGATCATCCG TATCGATCGC CTTGAGAAAT CCTTCGGCAG TCTGAAGGTA 
CTTGACGGCC TGTCGTTCGA CGTGATGCCG GGCGAGAAGC TGGCGCTGAT CGGGCCTTCG
GGCTCGGGCA AGACCACGAT CCTGCGCATC CTGATGACGC TGGAGACCAT CACCGGCGGC
CATGTCGAGG TGTGCGGCGA GCAGCTGTTC CACATGCGTC GCAACGGGGC CGAGCGGCCG
GCGGACGAGG CGCACCTGCA CCACATGCGC CGCCACATCG GCATGGTGTT CCAGCACTTC
AACCTGTTTC CGCACAAATG CGTGCTCGAC AACATCACGC TGGCGCCGAT CCTGACCAAG
GGCGAGCCGC GGGCCGCGGC CGAGCGGCGG GCGATGGACC TGCTCGACAT GGTGGGCCTT
GCCGACAAGG CCCGCGCCAT GCCCTCGCAG CTGTCGGGTG GCCAGAAGCA GCGCGTCGCG
ATTGCCCGCG CGCTGGCGCT GCAGCCGCGC ATCATGCTGT TCGACGAGAT CACGAGCGCG
CTCGACCCCG AACTGGTCGA GGAGGTGCTG CTGGTGATGA AGCGCCTCGC CGCCGAGACC
GACATGACCA TGCTTCTCGT CACCCACGAG ATGGGCTTTG CCCACGAGTT TGCCGACCGC
GTGCTGTTCT TCGACCGCGG CCGCATCGTC GAGCAGGGCC CGCCCGACCA GATCTTCACC
CGTCCGACGC ATGAACGCAC CCAATCCTTC CTGCGCAAGA TCATCGCCGC AGGGCACCGC
GTCTGA
 
Protein sequence
MTQPIIRIDR LEKSFGSLKV LDGLSFDVMP GEKLALIGPS GSGKTTILRI LMTLETITGG 
HVEVCGEQLF HMRRNGAERP ADEAHLHHMR RHIGMVFQHF NLFPHKCVLD NITLAPILTK
GEPRAAAERR AMDLLDMVGL ADKARAMPSQ LSGGQKQRVA IARALALQPR IMLFDEITSA
LDPELVEEVL LVMKRLAAET DMTMLLVTHE MGFAHEFADR VLFFDRGRIV EQGPPDQIFT
RPTHERTQSF LRKIIAAGHR V