Gene Rsph17025_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3158 
Symbol 
ID5085643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp19296 
End bp20051 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID640484730 
ProductABC-type Fe3+ transport system periplasmic component-like protein 
Protein accessionYP_001169347 
Protein GI146279189 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.797514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA GAGGCGTCGA ACGGATGCTC GATCTGTTGG AGTGGCTGGC CGAGACGCCG 
GGCCCCTACG GGCTGTCCGC GATCTCGACC GCTCTCGACA TGCCCAAGTC GAGCACCCTT
CTGATGCTTC GGTCGCTGAC CGAGCGGGGC TATCTGGAGC GCCTGCCTGC GGGCGATTAC
GCGCTGCGCC GCCTGCCGGG CGACGGCGCG GCCGGGCAGG GGGCGCTTCT TGCGCTGGTC
GGGCCCTATC TCTCGCGCGC GGTGGAGGAG ACCGGCGAGA GCGGCTTTCT CGCCGTGCTT
GAAAAGGGCC GGATCCGCTA TCTGAACAAG ATCCTGCCCG CGCGCGAGAT CCGCTACGAC
CGCGACATCT CGATGACGCG CGCGGCCCAC AAGGTGGCCA GCGGCGTGGT GCTGCTCGCG
GCGGGAGACG ATGCGGCGCT CGAGGCCCAT GCCGAGGCCG CGGGCCTTTC GGACGAGGAG
CGGGCGGCTC TCCTTTCGGC GGTCGACAAG GCGCGGGAGG CGGGGTTCTT CCTCAATCTG
AAGGGTGTGG TCGAAGGGGC GGCAGGGGCC GCCTCGGTCA TCCGCGACGC GACCGGCCGG
CCGGTCGGCG CCATCAACAT TTCCGGTCCG CAACCGCGAC TGGCCGCCCA TGCGGCGCTG
GTCGGAGCGG CCGTTCTGAA GACTGCCACC GCGGTGACCG AGGAGTTGCG CCGCCGTGGC
AGCCGAATTT CCAAGGGAGG AGAAGGAAAA CCATGA
 
Protein sequence
MSGRGVERML DLLEWLAETP GPYGLSAIST ALDMPKSSTL LMLRSLTERG YLERLPAGDY 
ALRRLPGDGA AGQGALLALV GPYLSRAVEE TGESGFLAVL EKGRIRYLNK ILPAREIRYD
RDISMTRAAH KVASGVVLLA AGDDAALEAH AEAAGLSDEE RAALLSAVDK AREAGFFLNL
KGVVEGAAGA ASVIRDATGR PVGAINISGP QPRLAAHAAL VGAAVLKTAT AVTEELRRRG
SRISKGGEGK P