Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3153 |
Symbol | |
ID | 5085638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 13011 |
End bp | 13745 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484725 |
Product | hypothetical protein |
Protein accession | YP_001169342 |
Protein GI | 146279184 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.641023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTCA TTGCCGCCCA TCACCTGGCC GTGCGGCGCG GCCGGGACGA GATCCTGTCG GACGTGAGCC TCGCGGTCGC GCCCGGCGAG ATCGTGACCA TCGTGGGCCC GAACGGGTCG GGCAAGAGCA CGCTTCTGCG CGCGCTTCTG GGCATCCTGC CGCCCGCCGC CGGTTCCGTG AGGCGCAAGC CGGGCCTGCG GATCGGTTAT GTCCCCCAGC GGCTGCAGGT GGACGGAACG CTTCCGCTGA CCGCGGCGCG ATTCCTGTCG CTTCCCCGCA GGCACGGGAC GGCCGAGGTC GAGACCGCCC TGCGCCGCGT GGGCGTGCCC GACGTGGCGG GCCGGCAGCT CGCCGACCTC TCGGGCGGGC AGTTCCAGCG CGTGCTTCTC GCGCGGGCCC TCCTGACCGA TCCCGAGCTT CTGATGCTCG ACGAACCGAC GCAGGGTCTC GACCAGCCGG GCGAAGCCGC GTTCTACCGC CTGATCGAGG AGGTCCGCTC GACCACGGGC GCCGCCGTGC TGATGGTCAG CCATGACCTG CATGTGGTGA TGGCGGCGTC GGACCGGGTG ATCTGCCTCA ACCGGCATGT CTGCTGCGAG GGCACACCGC GCGTGGTCTC GAACGCGCCG GAATACCGCG CGCTCTTCGG CCACGGGACG CAGGGGGCGC TGGCGCTTTA CCGCCACGAA CACGATCACG ACCATACCCA CGATGATCAT CACCACCATG CTTGA
|
Protein sequence | MSLIAAHHLA VRRGRDEILS DVSLAVAPGE IVTIVGPNGS GKSTLLRALL GILPPAAGSV RRKPGLRIGY VPQRLQVDGT LPLTAARFLS LPRRHGTAEV ETALRRVGVP DVAGRQLADL SGGQFQRVLL ARALLTDPEL LMLDEPTQGL DQPGEAAFYR LIEEVRSTTG AAVLMVSHDL HVVMAASDRV ICLNRHVCCE GTPRVVSNAP EYRALFGHGT QGALALYRHE HDHDHTHDDH HHHA
|
| |